Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:66975090..66978056-chr8:67341293..67343047,2	MCF-7	breast:
2	chr8:66976852..66977966-chr8:67088847..67090142,11	MCF-7	breast:

Variant related genes	Relation type
ENSG00000147576	Chromatin interaction

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11987000	0.89[EUR][1000 genomes]
rs11993015	0.89[EUR][1000 genomes]
rs16932461	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs16932465	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16932468	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs16932544	0.89[EUR][1000 genomes]
rs2357669	0.89[EUR][1000 genomes]
rs28396616	0.87[ASN][1000 genomes]
rs28491110	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4398895	1.00[ASN][1000 genomes]
rs4496952	1.00[EUR][1000 genomes]
rs56409403	1.00[EUR][1000 genomes]
rs56411320	0.93[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs56981664	1.00[EUR][1000 genomes]
rs58195552	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59142644	0.89[EUR][1000 genomes]
rs59792335	0.87[ASN][1000 genomes]
rs61437839	1.00[ASN][1000 genomes]
rs6472245	1.00[ASN][1000 genomes]
rs7006394	1.00[ASN][1000 genomes]
rs73246529	1.00[EUR][1000 genomes]
rs73246531	1.00[EUR][1000 genomes]
rs73246553	0.89[EUR][1000 genomes]
rs73691300	0.92[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	esv3414665	chr8:66936816-67381935	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:66976200-66978000	Enhancers	iPS-18 Cell Line	embryonic stem cell
2	chr8:66976200-66978000	Enhancers	HSMM	muscle
3	chr8:66976200-66978000	Enhancers	HSMMtube	muscle
4	chr8:66976400-66978000	Enhancers	Fetal Muscle Leg	muscle
5	chr8:66977200-66979600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr8:66977400-66978200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr8:66977600-66988200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr8:66977800-66978200	Weak transcription	HMEC	breast

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