Variant report
Variant | rs59810064 |
---|---|
Chromosome Location | chr4:19496323-19496324 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10003702 | 0.89[ASN][1000 genomes] |
rs10006103 | 0.96[ASN][1000 genomes] |
rs10006299 | 0.96[ASN][1000 genomes] |
rs10009772 | 0.99[ASN][1000 genomes] |
rs10012861 | 1.00[ASN][1000 genomes] |
rs10015294 | 0.92[ASN][1000 genomes] |
rs10025775 | 0.96[ASN][1000 genomes] |
rs10028337 | 0.99[ASN][1000 genomes] |
rs10031579 | 0.89[ASN][1000 genomes] |
rs10032188 | 0.99[ASN][1000 genomes] |
rs10032629 | 0.92[ASN][1000 genomes] |
rs10034324 | 0.96[ASN][1000 genomes] |
rs10212992 | 0.88[ASN][1000 genomes] |
rs10222803 | 0.96[ASN][1000 genomes] |
rs10222907 | 0.96[ASN][1000 genomes] |
rs10222971 | 0.95[ASN][1000 genomes] |
rs10223045 | 0.96[ASN][1000 genomes] |
rs10470799 | 0.90[ASN][1000 genomes] |
rs11933898 | 0.89[ASN][1000 genomes] |
rs11941599 | 1.00[ASN][1000 genomes] |
rs11941815 | 0.97[ASN][1000 genomes] |
rs11943058 | 0.86[ASN][1000 genomes] |
rs11943773 | 0.86[ASN][1000 genomes] |
rs11944084 | 0.85[ASN][1000 genomes] |
rs11945412 | 1.00[ASN][1000 genomes] |
rs11946126 | 0.97[ASN][1000 genomes] |
rs13434929 | 0.87[ASN][1000 genomes] |
rs1388145 | 0.87[ASN][1000 genomes] |
rs1388148 | 0.90[ASN][1000 genomes] |
rs16868608 | 0.92[ASN][1000 genomes] |
rs16868634 | 0.82[ASN][1000 genomes] |
rs28392619 | 0.96[ASN][1000 genomes] |
rs28406392 | 1.00[ASN][1000 genomes] |
rs28445313 | 0.89[ASN][1000 genomes] |
rs28468581 | 0.92[ASN][1000 genomes] |
rs28505527 | 0.99[ASN][1000 genomes] |
rs28506946 | 0.97[ASN][1000 genomes] |
rs28584356 | 0.90[ASN][1000 genomes] |
rs28612466 | 0.89[ASN][1000 genomes] |
rs28625215 | 0.96[ASN][1000 genomes] |
rs28649908 | 1.00[ASN][1000 genomes] |
rs28654609 | 0.96[ASN][1000 genomes] |
rs28662302 | 1.00[ASN][1000 genomes] |
rs28675174 | 0.92[ASN][1000 genomes] |
rs28698715 | 0.96[ASN][1000 genomes] |
rs28713269 | 1.00[ASN][1000 genomes] |
rs28749929 | 0.96[ASN][1000 genomes] |
rs28809022 | 0.92[ASN][1000 genomes] |
rs28834385 | 0.96[ASN][1000 genomes] |
rs28849735 | 0.92[ASN][1000 genomes] |
rs28861473 | 0.96[ASN][1000 genomes] |
rs4380521 | 0.90[ASN][1000 genomes] |
rs4472135 | 0.90[ASN][1000 genomes] |
rs4541506 | 1.00[ASN][1000 genomes] |
rs4572879 | 0.90[ASN][1000 genomes] |
rs4637398 | 1.00[ASN][1000 genomes] |
rs59192349 | 0.87[ASN][1000 genomes] |
rs60069867 | 1.00[ASN][1000 genomes] |
rs60284344 | 0.92[ASN][1000 genomes] |
rs61359326 | 0.92[ASN][1000 genomes] |
rs62296707 | 1.00[ASN][1000 genomes] |
rs62296709 | 1.00[ASN][1000 genomes] |
rs62298737 | 0.92[ASN][1000 genomes] |
rs62299872 | 0.81[ASN][1000 genomes] |
rs6837423 | 1.00[ASN][1000 genomes] |
rs73092965 | 0.92[ASN][1000 genomes] |
rs73092970 | 0.92[ASN][1000 genomes] |
rs73092977 | 0.92[ASN][1000 genomes] |
rs73092981 | 0.92[ASN][1000 genomes] |
rs73092983 | 0.92[ASN][1000 genomes] |
rs73092984 | 0.92[ASN][1000 genomes] |
rs73097402 | 0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs73099604 | 0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs73099613 | 1.00[ASN][1000 genomes] |
rs73099658 | 0.83[AFR][1000 genomes];1.00[ASN][1000 genomes] |
rs73099698 | 0.92[ASN][1000 genomes] |
rs73101116 | 0.92[ASN][1000 genomes] |
rs73101119 | 0.92[ASN][1000 genomes] |
rs73110735 | 0.90[ASN][1000 genomes] |
rs73110746 | 0.87[ASN][1000 genomes] |
rs9291404 | 0.90[ASN][1000 genomes] |
rs982066 | 0.90[ASN][1000 genomes] |
rs982067 | 0.90[ASN][1000 genomes] |
rs9990468 | 1.00[ASN][1000 genomes] |
rs9994751 | 0.90[ASN][1000 genomes] |
rs9998589 | 0.97[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv593785 | chr4:19092157-19521956 | Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
2 | nsv878732 | chr4:19172031-19660947 | Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
3 | nsv878733 | chr4:19335464-19928602 | Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
4 | nsv878734 | chr4:19474680-19598710 | Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
5 | nsv461286 | chr4:19488871-19709795 | Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
6 | nsv593786 | chr4:19488871-19709795 | Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr4:19496000-19497000 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |