Variant report

Variant rs59864125
Chromosome Location chr6:56371953-56371954
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:56308800-56373800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr6:56329200-56373800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
3 chr6:56330000-56372400 Weak transcription Lung lung
4 chr6:56337600-56376000 Weak transcription Gastric stomach
5 chr6:56341800-56407400 Weak transcription Spleen Spleen
6 chr6:56344800-56372200 Strong transcription Breast Myoepithelial Primary Cells Breast
7 chr6:56345000-56384200 Strong transcription HUES64 Cell Line embryonic stem cell
8 chr6:56346000-56372400 Weak transcription Psoas Muscle Psoas
9 chr6:56347600-56372200 Weak transcription Right Ventricle heart
10 chr6:56348200-56373400 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr6:56348600-56374600 Strong transcription Fetal Intestine Large intestine
12 chr6:56348800-56373400 Weak transcription Stomach Mucosa stomach
13 chr6:56351800-56386800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr6:56352000-56372600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr6:56352000-56373600 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr6:56352200-56373800 Weak transcription Fetal Thymus thymus
17 chr6:56357000-56382600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr6:56357000-56383600 Strong transcription NH-A brain
19 chr6:56357000-56384000 Strong transcription HSMM muscle
20 chr6:56357200-56384200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr6:56357600-56372200 Weak transcription A549 lung
22 chr6:56357600-56372400 Weak transcription NHEK skin
23 chr6:56357800-56372000 Weak transcription K562 blood
24 chr6:56357800-56372400 Weak transcription Pancreas Pancrea
25 chr6:56360400-56382200 Strong transcription Osteobl bone
26 chr6:56360600-56381800 Strong transcription Muscle Satellite Cultured Cells --
27 chr6:56360800-56377200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr6:56362400-56372200 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr6:56362400-56372600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr6:56362400-56373200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr6:56362400-56391200 Weak transcription Esophagus oesophagus
32 chr6:56362600-56372200 Weak transcription Primary hematopoietic stem cells short term culture blood
33 chr6:56362600-56373400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr6:56362600-56385800 Weak transcription iPS-15b Cell Line embryonic stem cell
35 chr6:56362800-56372800 Weak transcription H9 Cell Line embryonic stem cell
36 chr6:56362800-56400200 Weak transcription Colonic Mucosa Colon
37 chr6:56363000-56372400 Weak transcription Brain Angular Gyrus brain
38 chr6:56363000-56372400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr6:56363000-56402200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
40 chr6:56363200-56372400 Weak transcription Fetal Stomach stomach
41 chr6:56363400-56372600 Weak transcription Placenta Placenta
42 chr6:56364800-56378600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr6:56365000-56372200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr6:56365600-56379400 Weak transcription Pancreatic Islets Pancreatic Islet
45 chr6:56366000-56372600 Weak transcription Primary hematopoietic stem cells blood
46 chr6:56366200-56372400 Weak transcription Aorta Aorta
47 chr6:56366600-56372200 Weak transcription Primary monocytes fromperipheralblood blood
48 chr6:56367000-56376600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr6:56367400-56372200 Weak transcription Brain Substantia Nigra brain
50 chr6:56367800-56372200 Strong transcription Liver Liver

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