Variant report
| Variant | rs7761027 |
|---|---|
| Chromosome Location | chr6:56524770-56524771 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:56441000-56524800 | Weak transcription | Colonic Mucosa | Colon |
| 2 | chr6:56480800-56536400 | Weak transcription | Gastric | stomach |
| 3 | chr6:56491600-56536600 | Weak transcription | Fetal Brain Female | brain |
| 4 | chr6:56497800-56524800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 5 | chr6:56505600-56537400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 6 | chr6:56509800-56528200 | Weak transcription | Esophagus | oesophagus |
| 7 | chr6:56512600-56534400 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 8 | chr6:56513000-56534400 | Weak transcription | Fetal Muscle Leg | muscle |
| 9 | chr6:56514800-56537000 | Weak transcription | Lung | lung |
| 10 | chr6:56515000-56534400 | Weak transcription | Fetal Muscle Trunk | muscle |
| 11 | chr6:56516600-56524800 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 12 | chr6:56517400-56536400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 13 | chr6:56518200-56524800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 14 | chr6:56519000-56524800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 15 | chr6:56519000-56524800 | Weak transcription | NH-A | brain |
| 16 | chr6:56520000-56526400 | Enhancers | Brain Substantia Nigra | brain |
| 17 | chr6:56520000-56526800 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
| 18 | chr6:56520000-56526800 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 19 | chr6:56520200-56527400 | Enhancers | Brain Cingulate Gyrus | brain |
| 20 | chr6:56521000-56524800 | Weak transcription | Psoas Muscle | Psoas |
| 21 | chr6:56521000-56525000 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 22 | chr6:56521000-56536600 | Weak transcription | Fetal Stomach | stomach |
| 23 | chr6:56521200-56528200 | Weak transcription | Right Atrium | heart |
| 24 | chr6:56521200-56532800 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 25 | chr6:56521200-56536400 | Weak transcription | Right Ventricle | heart |
| 26 | chr6:56521400-56524800 | Weak transcription | Osteobl | bone |
| 27 | chr6:56521400-56534400 | Weak transcription | NHLF | lung |
| 28 | chr6:56521600-56524800 | Weak transcription | Small Intestine | intestine |
| 29 | chr6:56521600-56528200 | Weak transcription | Stomach Mucosa | stomach |
| 30 | chr6:56521800-56525000 | Weak transcription | NHDF-Ad | bronchial |
| 31 | chr6:56522000-56524800 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 32 | chr6:56522000-56535000 | Weak transcription | HUVEC | blood vessel |
| 33 | chr6:56522000-56536400 | Weak transcription | Adipose Nuclei | Adipose |
| 34 | chr6:56522400-56524800 | Strong transcription | HSMMtube | muscle |
| 35 | chr6:56522400-56527800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 36 | chr6:56522800-56525000 | Strong transcription | HSMM | muscle |
| 37 | chr6:56523000-56524800 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 38 | chr6:56523000-56525000 | Enhancers | Fetal Intestine Small | intestine |
| 39 | chr6:56523000-56525400 | Genic enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 40 | chr6:56523000-56526400 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 41 | chr6:56523200-56524800 | Enhancers | HMEC | breast |
| 42 | chr6:56523200-56526200 | Enhancers | Brain Hippocampus Middle | brain |
| 43 | chr6:56523400-56525400 | Enhancers | Brain Inferior Temporal Lobe | brain |
| 44 | chr6:56523400-56527600 | Enhancers | Brain Angular Gyrus | brain |
| 45 | chr6:56523600-56525200 | Enhancers | Fetal Thymus | thymus |
| 46 | chr6:56523600-56525400 | Enhancers | Brain Dorsolateral Prefrontal Cortex | brain |
| 47 | chr6:56523600-56531800 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 48 | chr6:56524000-56525400 | Enhancers | Colon Smooth Muscle | Colon |
| 49 | chr6:56524000-56525600 | Enhancers | Brain Anterior Caudate | brain |
| 50 | chr6:56524000-56526600 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
