The 2.0 version of rSNPBase

Variant report

Variant rs4133076
Chromosome Location chr6:56551900-56551901
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:56527000-56554400 Weak transcription HUES6 Cell Line embryonic stem cell
2 chr6:56529600-56553800 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr6:56535200-56555200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr6:56537200-56553400 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr6:56537200-56555200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr6:56537600-56552600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr6:56537600-56553600 Weak transcription Fetal Stomach stomach
8 chr6:56543000-56559400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr6:56545600-56553400 Enhancers Brain Hippocampus Middle brain
10 chr6:56546200-56552400 Enhancers Brain Substantia Nigra brain
11 chr6:56546200-56564800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr6:56546800-56555400 Weak transcription ES-WA7 Cell Line embryonic stem cell
13 chr6:56547200-56552200 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr6:56547200-56552400 Enhancers Brain Angular Gyrus brain
15 chr6:56547200-56553400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr6:56547200-56554000 Enhancers Brain Cingulate Gyrus brain
17 chr6:56547200-56557400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr6:56547400-56552400 Enhancers Brain Inferior Temporal Lobe brain
19 chr6:56547400-56552400 Enhancers Ovary ovary
20 chr6:56547400-56552800 Enhancers Brain Anterior Caudate brain
21 chr6:56547400-56561600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr6:56548600-56552400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
23 chr6:56548800-56553000 Enhancers Skeletal Muscle Male skeletal muscle
24 chr6:56548800-56554000 Enhancers Skeletal Muscle Female skeletal muscle
25 chr6:56549000-56553400 Weak transcription Small Intestine intestine
26 chr6:56549000-56553800 Weak transcription Adipose Nuclei Adipose
27 chr6:56549400-56553400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr6:56549400-56553400 Weak transcription Hela-S3 cervix
29 chr6:56549400-56553400 Weak transcription NHEK skin
30 chr6:56549400-56553600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr6:56549600-56552200 Weak transcription Cortex derived primary cultured neurospheres brain
32 chr6:56549600-56552200 Weak transcription Stomach Mucosa stomach
33 chr6:56549600-56552800 Weak transcription Colon Smooth Muscle Colon
34 chr6:56549600-56552800 Weak transcription Duodenum Mucosa Duodenum
35 chr6:56549600-56553400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr6:56549600-56553600 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr6:56549600-56553600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
38 chr6:56549600-56553600 Weak transcription Colonic Mucosa Colon
39 chr6:56549600-56553600 Enhancers HepG2 liver
40 chr6:56549600-56554200 Weak transcription NH-A brain
41 chr6:56549600-56554400 Weak transcription HUES64 Cell Line embryonic stem cell
42 chr6:56549600-56554600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
43 chr6:56549600-56554600 Weak transcription HUVEC blood vessel
44 chr6:56549600-56558000 Weak transcription HMEC breast
45 chr6:56549600-56573600 Weak transcription iPS-18 Cell Line embryonic stem cell
46 chr6:56549800-56553400 Weak transcription HUES48 Cell Line embryonic stem cell
47 chr6:56549800-56553400 Weak transcription GM12878-XiMat blood
48 chr6:56549800-56554200 Weak transcription Fetal Muscle Leg muscle
49 chr6:56549800-56555200 Weak transcription Fetal Heart heart
50 chr6:56549800-56555200 Weak transcription Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015