The 2.0 version of rSNPBase

Variant report

Variant rs7749437
Chromosome Location chr6:56529486-56529487
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:56480800-56536400 Weak transcription Gastric stomach
2 chr6:56491600-56536600 Weak transcription Fetal Brain Female brain
3 chr6:56505600-56537400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr6:56512600-56534400 Weak transcription Fetal Adrenal Gland Adrenal Gland
5 chr6:56513000-56534400 Weak transcription Fetal Muscle Leg muscle
6 chr6:56514800-56537000 Weak transcription Lung lung
7 chr6:56515000-56534400 Weak transcription Fetal Muscle Trunk muscle
8 chr6:56517400-56536400 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr6:56521000-56536600 Weak transcription Fetal Stomach stomach
10 chr6:56521200-56532800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr6:56521200-56536400 Weak transcription Right Ventricle heart
12 chr6:56521400-56534400 Weak transcription NHLF lung
13 chr6:56522000-56535000 Weak transcription HUVEC blood vessel
14 chr6:56522000-56536400 Weak transcription Adipose Nuclei Adipose
15 chr6:56523600-56531800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr6:56524800-56534400 Weak transcription HSMMtube muscle
17 chr6:56524800-56536400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr6:56525200-56531400 Weak transcription Primary hematopoietic stem cells blood
19 chr6:56525200-56532000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr6:56525200-56532200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr6:56525200-56534600 Weak transcription Thymus Thymus
22 chr6:56525200-56534800 Weak transcription Left Ventricle heart
23 chr6:56525200-56535400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr6:56525200-56536000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr6:56525400-56536400 Weak transcription Stomach Smooth Muscle stomach
26 chr6:56525600-56534400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr6:56525800-56530600 Enhancers Breast Myoepithelial Primary Cells Breast
28 chr6:56526400-56533000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr6:56526400-56536200 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr6:56526400-56536600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr6:56526400-56540400 Weak transcription iPS-20b Cell Line embryonic stem cell
32 chr6:56526400-56549200 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr6:56526600-56531000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr6:56526800-56531200 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr6:56526800-56531200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr6:56526800-56534400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr6:56526800-56537000 Weak transcription H1 Cell Line embryonic stem cell
38 chr6:56527000-56532800 Weak transcription HUES64 Cell Line embryonic stem cell
39 chr6:56527000-56536600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
40 chr6:56527000-56554400 Weak transcription HUES6 Cell Line embryonic stem cell
41 chr6:56527400-56536600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
42 chr6:56527600-56530000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr6:56527800-56530000 Enhancers Brain Substantia Nigra brain
44 chr6:56527800-56530600 Enhancers A549 lung
45 chr6:56527800-56531600 Weak transcription Fetal Thymus thymus
46 chr6:56528000-56530600 Enhancers Skeletal Muscle Male skeletal muscle
47 chr6:56528000-56536400 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr6:56528200-56529600 Enhancers Fetal Heart heart
49 chr6:56528200-56529600 Enhancers HepG2 liver
50 chr6:56528200-56529800 Enhancers Liver Liver

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Last update: Aug 31, 2015