Variant report
| Variant | rs58565063 |
|---|---|
| Chromosome Location | chr6:56538392-56538393 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:56526400-56540400 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 2 | chr6:56526400-56549200 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 3 | chr6:56527000-56554400 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 4 | chr6:56529600-56553800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 5 | chr6:56532600-56547200 | Weak transcription | HepG2 | liver |
| 6 | chr6:56535200-56539000 | Enhancers | Liver | Liver |
| 7 | chr6:56535200-56555200 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 8 | chr6:56535600-56538600 | Weak transcription | Osteobl | bone |
| 9 | chr6:56535600-56548600 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 10 | chr6:56535600-56549200 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 11 | chr6:56536800-56539000 | Enhancers | Brain Anterior Caudate | brain |
| 12 | chr6:56537000-56539200 | Enhancers | Fetal Intestine Large | intestine |
| 13 | chr6:56537000-56539400 | Enhancers | Fetal Intestine Small | intestine |
| 14 | chr6:56537000-56539800 | Enhancers | Brain Hippocampus Middle | brain |
| 15 | chr6:56537000-56542000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 16 | chr6:56537000-56551800 | Weak transcription | Esophagus | oesophagus |
| 17 | chr6:56537200-56538400 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
| 18 | chr6:56537200-56538400 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 19 | chr6:56537200-56538400 | Enhancers | Brain Cingulate Gyrus | brain |
| 20 | chr6:56537200-56538400 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 21 | chr6:56537200-56539000 | Enhancers | Brain Inferior Temporal Lobe | brain |
| 22 | chr6:56537200-56540400 | Enhancers | Brain Substantia Nigra | brain |
| 23 | chr6:56537200-56542000 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 24 | chr6:56537200-56542000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 25 | chr6:56537200-56542000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 26 | chr6:56537200-56542000 | Weak transcription | Psoas Muscle | Psoas |
| 27 | chr6:56537200-56542000 | Weak transcription | Right Ventricle | heart |
| 28 | chr6:56537200-56542000 | Weak transcription | HMEC | breast |
| 29 | chr6:56537200-56542000 | Weak transcription | NHDF-Ad | bronchial |
| 30 | chr6:56537200-56542200 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 31 | chr6:56537200-56542200 | Weak transcription | Aorta | Aorta |
| 32 | chr6:56537200-56542200 | Weak transcription | A549 | lung |
| 33 | chr6:56537200-56542200 | Weak transcription | NHEK | skin |
| 34 | chr6:56537200-56542400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 35 | chr6:56537200-56542400 | Weak transcription | NH-A | brain |
| 36 | chr6:56537200-56542600 | Weak transcription | Lung | lung |
| 37 | chr6:56537200-56542600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 38 | chr6:56537200-56545200 | Weak transcription | Ovary | ovary |
| 39 | chr6:56537200-56545400 | Weak transcription | Gastric | stomach |
| 40 | chr6:56537200-56547400 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 41 | chr6:56537200-56548000 | Weak transcription | Stomach Mucosa | stomach |
| 42 | chr6:56537200-56548200 | Weak transcription | Small Intestine | intestine |
| 43 | chr6:56537200-56548600 | Weak transcription | Colonic Mucosa | Colon |
| 44 | chr6:56537200-56553400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 45 | chr6:56537200-56555200 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 46 | chr6:56537400-56548400 | Weak transcription | Adipose Nuclei | Adipose |
| 47 | chr6:56537600-56538600 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 48 | chr6:56537600-56538800 | Weak transcription | GM12878-XiMat | blood |
| 49 | chr6:56537600-56542000 | Weak transcription | Fetal Heart | heart |
| 50 | chr6:56537600-56542000 | Weak transcription | HUVEC | blood vessel |
