Variant report
| Variant | rs57289287 |
|---|---|
| Chromosome Location | chr6:56509743-56509744 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:56417000-56516400 | Weak transcription | Pancreas | Pancrea |
| 2 | chr6:56432800-56513600 | Weak transcription | Small Intestine | intestine |
| 3 | chr6:56441000-56524800 | Weak transcription | Colonic Mucosa | Colon |
| 4 | chr6:56451800-56514200 | Weak transcription | Primary hematopoietic stem cells | blood |
| 5 | chr6:56452200-56514600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 6 | chr6:56459000-56521000 | Weak transcription | Spleen | Spleen |
| 7 | chr6:56460600-56513600 | Weak transcription | Stomach Mucosa | stomach |
| 8 | chr6:56478400-56514600 | Weak transcription | Lung | lung |
| 9 | chr6:56480600-56514600 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 10 | chr6:56480800-56536400 | Weak transcription | Gastric | stomach |
| 11 | chr6:56482000-56518200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 12 | chr6:56483400-56512600 | Weak transcription | Psoas Muscle | Psoas |
| 13 | chr6:56485000-56514400 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 14 | chr6:56485800-56512400 | Weak transcription | Fetal Stomach | stomach |
| 15 | chr6:56490000-56513600 | Strong transcription | Fetal Intestine Large | intestine |
| 16 | chr6:56491600-56536600 | Weak transcription | Fetal Brain Female | brain |
| 17 | chr6:56496600-56517000 | Weak transcription | Fetal Brain Male | brain |
| 18 | chr6:56496800-56515000 | Weak transcription | Fetal Kidney | kidney |
| 19 | chr6:56497800-56524800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 20 | chr6:56499400-56510000 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 21 | chr6:56499400-56511800 | Weak transcription | Ovary | ovary |
| 22 | chr6:56499400-56516800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 23 | chr6:56500600-56509800 | Weak transcription | Brain Germinal Matrix | brain |
| 24 | chr6:56500600-56514200 | Weak transcription | Fetal Heart | heart |
| 25 | chr6:56500800-56513000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 26 | chr6:56501800-56524600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 27 | chr6:56502000-56512400 | Weak transcription | Fetal Intestine Small | intestine |
| 28 | chr6:56505400-56510000 | Weak transcription | Placenta | Placenta |
| 29 | chr6:56505400-56514600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 30 | chr6:56505600-56510000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 31 | chr6:56505600-56510000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 32 | chr6:56505600-56511800 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 33 | chr6:56505600-56522000 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 34 | chr6:56505600-56537400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 35 | chr6:56505800-56510000 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 36 | chr6:56506000-56516000 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 37 | chr6:56507200-56511000 | Strong transcription | Fetal Muscle Leg | muscle |
| 38 | chr6:56507400-56515800 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 39 | chr6:56507800-56514400 | Weak transcription | Aorta | Aorta |
| 40 | chr6:56508000-56509800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 41 | chr6:56508200-56510000 | Weak transcription | Brain Substantia Nigra | brain |
| 42 | chr6:56508200-56514000 | Weak transcription | Hela-S3 | cervix |
| 43 | chr6:56508200-56514600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 44 | chr6:56508200-56520000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 45 | chr6:56508400-56510000 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 46 | chr6:56508400-56510000 | Weak transcription | HepG2 | liver |
| 47 | chr6:56508400-56512000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 48 | chr6:56508600-56509800 | Weak transcription | NH-A | brain |
| 49 | chr6:56508600-56510400 | Enhancers | NHEK | skin |
| 50 | chr6:56508800-56509800 | Genic enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
