Variant report

Variant	rs59871527
Chromosome Location	chr14:69650098-69650099
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:69649327..69654053-chr14:69656065..69659968,5	K562	blood:
2	chr14:69626126..69627931-chr14:69649788..69652518,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-DCAF5-1	chr14:69649737-69651214	ENSG00000258957
2	lnc-DCAF5-1	chr14:69649962-69651214	NONHSAT037510

Variant related genes	Relation type
ENSG00000258957	Chromatin interaction
ENSG00000081177	Chromatin interaction

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs17106764	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17106793	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56922727	1.00[AMR][1000 genomes]
rs57103818	1.00[AMR][1000 genomes]
rs58395904	1.00[AMR][1000 genomes]
rs59157439	1.00[AMR][1000 genomes]
rs60643493	1.00[AMR][1000 genomes]
rs60660183	1.00[AMR][1000 genomes]
rs7142735	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73275510	1.00[AMR][1000 genomes]
rs73275520	1.00[AMR][1000 genomes]
rs73275568	1.00[AMR][1000 genomes]
rs73275583	1.00[AMR][1000 genomes]
rs73275592	1.00[AMR][1000 genomes]
rs73275597	1.00[AMR][1000 genomes]
rs73275598	1.00[AMR][1000 genomes]
rs73275599	1.00[AMR][1000 genomes]
rs73275602	1.00[AMR][1000 genomes]
rs73277010	1.00[AMR][1000 genomes]
rs73277013	1.00[AMR][1000 genomes]
rs73277015	1.00[AMR][1000 genomes]
rs73277016	1.00[AMR][1000 genomes]
rs73277032	1.00[AMR][1000 genomes]
rs73278952	1.00[AMR][1000 genomes]
rs73278958	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73278965	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73278972	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73278980	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73278990	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73278996	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73280821	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73280853	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73280860	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73280900	1.00[AMR][1000 genomes]
rs73282607	1.00[AMR][1000 genomes]
rs73282617	1.00[AMR][1000 genomes]
rs8016668	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69649800-69650400	Enhancers	HUES64 Cell Line	embryonic stem cell
2	chr14:69650000-69650400	Enhancers	ES-WA7 Cell Line	embryonic stem cell
3	chr14:69650000-69650800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
4	chr14:69650000-69650800	Enhancers	HepG2	liver
5	chr14:69650000-69650800	Enhancers	Monocytes-CD14+_RO01746	blood
6	chr14:69650000-69651200	Enhancers	iPS-18 Cell Line	embryonic stem cell
7	chr14:69650000-69651400	Enhancers	HUES48 Cell Line	embryonic stem cell
8	chr14:69650000-69651600	Enhancers	iPS-20b Cell Line	embryonic stem cell

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