The 2.0 version of rSNPBase

Variant report

Variant rs60229944
Chromosome Location chr19:39644990-39644991
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:39617400-39659800 Weak transcription Primary T regulatory cells fromperipheralblood blood
2 chr19:39618400-39646600 Weak transcription Primary T helper cells fromperipheralblood blood
3 chr19:39623400-39646000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr19:39624000-39647000 Weak transcription NHLF lung
5 chr19:39627200-39646800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr19:39627600-39645800 Weak transcription Primary T cells fromperipheralblood blood
7 chr19:39630800-39646800 Weak transcription Osteobl bone
8 chr19:39630800-39651000 Weak transcription NHDF-Ad bronchial
9 chr19:39631000-39660000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr19:39635400-39645600 Weak transcription Spleen Spleen
11 chr19:39635400-39647000 Weak transcription Muscle Satellite Cultured Cells --
12 chr19:39635600-39647000 Weak transcription NH-A brain
13 chr19:39635600-39647400 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr19:39635800-39646000 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr19:39636000-39647400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr19:39636000-39668200 Weak transcription Primary B cells from cord blood blood
17 chr19:39636400-39645000 Weak transcription Adipose Nuclei Adipose
18 chr19:39636400-39665600 Weak transcription Aorta Aorta
19 chr19:39636800-39650800 Weak transcription HUVEC blood vessel
20 chr19:39637000-39645400 Weak transcription Right Ventricle heart
21 chr19:39637000-39653600 Weak transcription Brain Germinal Matrix brain
22 chr19:39637200-39647000 Weak transcription Small Intestine intestine
23 chr19:39637400-39645800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr19:39637400-39647400 Weak transcription Rectal Smooth Muscle rectum
25 chr19:39637400-39660800 Weak transcription Primary hematopoietic stem cells blood
26 chr19:39637600-39645200 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr19:39638000-39645400 Weak transcription Stomach Smooth Muscle stomach
28 chr19:39638000-39646000 Weak transcription Colon Smooth Muscle Colon
29 chr19:39638000-39646800 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr19:39638000-39661400 Weak transcription H9 Cell Line embryonic stem cell
31 chr19:39638200-39648600 Weak transcription Brain Angular Gyrus brain
32 chr19:39638400-39645000 Weak transcription iPS-20b Cell Line embryonic stem cell
33 chr19:39640000-39646600 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr19:39640000-39647600 Weak transcription HSMMtube muscle
35 chr19:39640000-39648400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr19:39640000-39672600 Weak transcription GM12878-XiMat blood
37 chr19:39640200-39645000 Weak transcription HUES64 Cell Line embryonic stem cell
38 chr19:39640200-39645200 Weak transcription Brain Anterior Caudate brain
39 chr19:39640200-39646600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr19:39640200-39647400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr19:39640200-39647400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr19:39640200-39660000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr19:39641000-39646200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr19:39641200-39649200 Weak transcription Fetal Brain Female brain
45 chr19:39641400-39646600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr19:39641800-39645400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr19:39641800-39646400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr19:39642000-39649600 Enhancers Placenta Placenta
49 chr19:39642200-39646400 Weak transcription Brain Inferior Temporal Lobe brain
50 chr19:39642200-39647400 Weak transcription Right Atrium heart

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015