Variant report

Variant	rs60286805
Chromosome Location	chr6:113982241-113982242
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs12200427	0.82[AFR][1000 genomes]
rs12200934	0.82[AFR][1000 genomes]
rs12201635	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12204123	0.93[AFR][1000 genomes];0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12205015	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12209179	0.82[AFR][1000 genomes]
rs12213207	0.82[AFR][1000 genomes]
rs56313227	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62415965	0.82[AFR][1000 genomes]
rs62415966	0.82[AFR][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:113976000-113990800	Weak transcription	Psoas Muscle	Psoas
2	chr6:113976200-113982800	Weak transcription	Adipose Nuclei	Adipose
3	chr6:113977600-113983000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr6:113979000-113982400	Enhancers	HepG2	liver
5	chr6:113979600-113983800	Enhancers	GM12878-XiMat	blood
6	chr6:113981000-113983400	Enhancers	Fetal Intestine Large	intestine
7	chr6:113981000-113983400	Enhancers	Fetal Intestine Small	intestine
8	chr6:113981200-113983600	Enhancers	Primary monocytes fromperipheralblood	blood
9	chr6:113981600-113982400	Enhancers	Primary neutrophils fromperipheralblood	blood
10	chr6:113981600-113982400	Enhancers	Placenta	Placenta
11	chr6:113981600-113983800	Weak transcription	Duodenum Mucosa	Duodenum
12	chr6:113982000-113983800	Enhancers	Monocytes-CD14+_RO01746	blood
13	chr6:113982200-113982400	Enhancers	Primary B cells from cord blood	blood
14	chr6:113982200-113982400	Enhancers	Stomach Mucosa	stomach
15	chr6:113982200-113983800	Enhancers	Breast Myoepithelial Primary Cells	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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