Variant report

Variant	rs60436002
Chromosome Location	chr14:84923458-84923459
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 51 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs10151029	0.87[ASN][1000 genomes]
rs11846527	0.90[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs1375450	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17094379	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17120010	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17120043	0.89[ASN][1000 genomes]
rs17120050	0.89[ASN][1000 genomes]
rs17841070	0.89[ASN][1000 genomes]
rs2922628	0.89[ASN][1000 genomes]
rs2998297	0.89[ASN][1000 genomes]
rs55798405	0.89[ASN][1000 genomes]
rs58840513	0.89[ASN][1000 genomes]
rs66541561	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67378160	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67803520	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs68173195	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72687280	0.89[ASN][1000 genomes]
rs72687282	0.89[ASN][1000 genomes]
rs72687288	0.89[ASN][1000 genomes]
rs72687290	0.89[ASN][1000 genomes]
rs72687292	0.89[ASN][1000 genomes]
rs72687293	0.89[ASN][1000 genomes]
rs72687296	0.89[ASN][1000 genomes]
rs72687297	0.89[ASN][1000 genomes]
rs72687298	0.89[ASN][1000 genomes]
rs72687300	0.89[ASN][1000 genomes]
rs72687302	0.89[ASN][1000 genomes]
rs72688804	0.89[ASN][1000 genomes]
rs72688806	0.89[ASN][1000 genomes]
rs72688807	0.89[ASN][1000 genomes]
rs72688808	0.89[ASN][1000 genomes]
rs72688811	0.89[ASN][1000 genomes]
rs72688813	0.89[ASN][1000 genomes]
rs72688814	0.89[ASN][1000 genomes]
rs72688815	0.89[ASN][1000 genomes]
rs72688883	0.89[ASN][1000 genomes]
rs72688893	0.89[ASN][1000 genomes]
rs72688898	0.89[ASN][1000 genomes]
rs72690604	0.89[ASN][1000 genomes]
rs72690616	0.89[ASN][1000 genomes]
rs72690617	0.89[ASN][1000 genomes]
rs72690619	0.89[ASN][1000 genomes]
rs72690622	0.89[ASN][1000 genomes]
rs72690624	0.89[ASN][1000 genomes]
rs72706914	1.00[ASN][1000 genomes]
rs72706915	1.00[ASN][1000 genomes]
rs72707153	0.87[ASN][1000 genomes]
rs73372762	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73372780	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73373896	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2751288	chr14:84815330-85704047	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84922800-84923600	Enhancers	ES-I3 Cell Line	embryonic stem cell
2	chr14:84923000-84923600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr14:84923200-84923600	Enhancers	Fetal Brain Female	brain
4	chr14:84923200-84924000	Enhancers	Fetal Lung	lung

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