The 2.0 version of rSNPBase

Variant report

Variant rs60471485
Chromosome Location chr1:76545314-76545315
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:76541000-76546600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:76541200-76546600 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr1:76541200-76551200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr1:76541400-76545400 Weak transcription Lung lung
5 chr1:76541600-76545400 Weak transcription HUES6 Cell Line embryonic stem cell
6 chr1:76541600-76545400 Weak transcription iPS-18 Cell Line embryonic stem cell
7 chr1:76541600-76548000 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr1:76541600-76550000 Weak transcription H9 Cell Line embryonic stem cell
9 chr1:76541800-76546200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr1:76541800-76547400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr1:76542000-76545600 Weak transcription iPS-20b Cell Line embryonic stem cell
12 chr1:76542000-76547400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr1:76542200-76545400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr1:76542200-76545800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr1:76542200-76546200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr1:76542200-76546400 Weak transcription Colon Smooth Muscle Colon
17 chr1:76542200-76546400 Weak transcription Fetal Muscle Leg muscle
18 chr1:76542200-76546600 Weak transcription Fetal Brain Female brain
19 chr1:76542200-76553200 Weak transcription Fetal Intestine Large intestine
20 chr1:76542400-76545400 Weak transcription Primary hematopoietic stem cells blood
21 chr1:76542400-76545800 Weak transcription Fetal Lung lung
22 chr1:76542400-76546200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr1:76542400-76546400 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr1:76542400-76550000 Weak transcription Primary B cells from peripheral blood blood
25 chr1:76542800-76545400 Weak transcription Fetal Stomach stomach
26 chr1:76542800-76545400 Weak transcription Left Ventricle heart
27 chr1:76542800-76546400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr1:76542800-76546400 Weak transcription Brain Inferior Temporal Lobe brain
29 chr1:76542800-76547200 Weak transcription Brain Angular Gyrus brain
30 chr1:76542800-76572000 Weak transcription Primary B cells from cord blood blood
31 chr1:76543000-76546200 Weak transcription Primary monocytes fromperipheralblood blood
32 chr1:76543200-76546400 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr1:76543400-76545400 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr1:76544400-76546400 Weak transcription Brain Cingulate Gyrus brain
35 chr1:76545200-76545400 Enhancers Brain Substantia Nigra brain
36 chr1:76545200-76545600 Enhancers iPS-15b Cell Line embryonic stem cell
37 chr1:76545200-76545800 Enhancers H1 Cell Line embryonic stem cell
38 chr1:76545200-76545800 Enhancers HUES64 Cell Line embryonic stem cell
39 chr1:76545200-76545800 Enhancers Brain Anterior Caudate brain
40 chr1:76545200-76546400 Enhancers HUES48 Cell Line embryonic stem cell
41 chr1:76545200-76548600 Enhancers Brain Hippocampus Middle brain
42 chr1:76545200-76548800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015