The 2.0 version of rSNPBase

Variant report

Variant rs72988551
Chromosome Location chr1:76543211-76543212
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:76541000-76546600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:76541200-76546600 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr1:76541200-76551200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr1:76541400-76545400 Weak transcription Lung lung
5 chr1:76541600-76545400 Weak transcription HUES6 Cell Line embryonic stem cell
6 chr1:76541600-76545400 Weak transcription iPS-18 Cell Line embryonic stem cell
7 chr1:76541600-76548000 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr1:76541600-76550000 Weak transcription H9 Cell Line embryonic stem cell
9 chr1:76541800-76545200 Weak transcription H1 Cell Line embryonic stem cell
10 chr1:76541800-76545200 Weak transcription HUES64 Cell Line embryonic stem cell
11 chr1:76541800-76546200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr1:76541800-76547400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr1:76542000-76545600 Weak transcription iPS-20b Cell Line embryonic stem cell
14 chr1:76542000-76547400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:76542200-76543400 Enhancers Fetal Adrenal Gland Adrenal Gland
16 chr1:76542200-76543600 Enhancers Brain Cingulate Gyrus brain
17 chr1:76542200-76544200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
18 chr1:76542200-76544200 Enhancers Brain Substantia Nigra brain
19 chr1:76542200-76545200 Weak transcription HUES48 Cell Line embryonic stem cell
20 chr1:76542200-76545400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr1:76542200-76545800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr1:76542200-76546200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr1:76542200-76546400 Weak transcription Colon Smooth Muscle Colon
24 chr1:76542200-76546400 Weak transcription Fetal Muscle Leg muscle
25 chr1:76542200-76546600 Weak transcription Fetal Brain Female brain
26 chr1:76542200-76553200 Weak transcription Fetal Intestine Large intestine
27 chr1:76542400-76545400 Weak transcription Primary hematopoietic stem cells blood
28 chr1:76542400-76545800 Weak transcription Fetal Lung lung
29 chr1:76542400-76546200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr1:76542400-76546400 Weak transcription Primary hematopoietic stem cells short term culture blood
31 chr1:76542400-76550000 Weak transcription Primary B cells from peripheral blood blood
32 chr1:76542800-76545400 Weak transcription Fetal Stomach stomach
33 chr1:76542800-76545400 Weak transcription Left Ventricle heart
34 chr1:76542800-76546400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr1:76542800-76546400 Weak transcription Brain Inferior Temporal Lobe brain
36 chr1:76542800-76547200 Weak transcription Brain Angular Gyrus brain
37 chr1:76542800-76572000 Weak transcription Primary B cells from cord blood blood
38 chr1:76543000-76546200 Weak transcription Primary monocytes fromperipheralblood blood
39 chr1:76543200-76545200 Weak transcription Brain Anterior Caudate brain
40 chr1:76543200-76545200 Weak transcription Brain Hippocampus Middle brain
41 chr1:76543200-76546400 Weak transcription Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015