Variant report

Variant rs60536875
Chromosome Location chr3:105542635-105542636
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:105483200-105555200 Weak transcription Placenta Placenta
2 chr3:105505000-105548200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr3:105511400-105566400 Weak transcription Aorta Aorta
4 chr3:105521200-105546800 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr3:105528400-105543200 Weak transcription Gastric stomach
6 chr3:105528400-105553600 Weak transcription Fetal Kidney kidney
7 chr3:105529000-105546600 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr3:105531400-105546600 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr3:105531600-105546400 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr3:105532200-105563000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr3:105533600-105560600 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr3:105533800-105570000 Weak transcription Dnd41 blood
13 chr3:105534200-105566200 Weak transcription Brain Germinal Matrix brain
14 chr3:105534400-105546600 Weak transcription iPS-20b Cell Line embryonic stem cell
15 chr3:105535600-105553800 Weak transcription Fetal Brain Male brain
16 chr3:105536600-105543200 Weak transcription Right Ventricle heart
17 chr3:105537800-105546800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr3:105538800-105545000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
19 chr3:105539200-105543200 Weak transcription Lung lung
20 chr3:105539200-105546200 Weak transcription Esophagus oesophagus
21 chr3:105539400-105551600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr3:105539800-105544400 Enhancers Stomach Mucosa stomach
23 chr3:105540000-105543600 Enhancers Fetal Intestine Large intestine
24 chr3:105540000-105544200 Genic enhancers Primary T helper cells PMA-I stimulated --
25 chr3:105540200-105542800 Genic enhancers Primary B cells from cord blood blood
26 chr3:105540200-105542800 Enhancers Sigmoid Colon Sigmoid Colon
27 chr3:105540200-105543400 Enhancers HepG2 liver
28 chr3:105540200-105543600 Enhancers Primary T helper naive cells from peripheral blood blood
29 chr3:105540200-105543600 Enhancers Fetal Adrenal Gland Adrenal Gland
30 chr3:105540200-105543800 Enhancers Fetal Intestine Small intestine
31 chr3:105540200-105543800 Enhancers Small Intestine intestine
32 chr3:105540200-105543800 Enhancers Hela-S3 cervix
33 chr3:105540200-105544000 Enhancers Primary T killer naive cells fromperipheralblood blood
34 chr3:105540200-105544000 Enhancers Rectal Mucosa Donor 31 rectum
35 chr3:105540200-105544200 Genic enhancers Osteobl bone
36 chr3:105540400-105544400 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr3:105540400-105545000 Enhancers Primary T killer memory cells from peripheral blood blood
38 chr3:105540800-105543800 Enhancers HSMM muscle
39 chr3:105540800-105569600 Weak transcription Fetal Thymus thymus
40 chr3:105541000-105543200 Enhancers ES-WA7 Cell Line embryonic stem cell
41 chr3:105541000-105543600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
42 chr3:105541000-105554400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr3:105541200-105542800 Enhancers Brain Anterior Caudate brain
44 chr3:105541200-105543000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr3:105541200-105543200 Strong transcription Primary T cells from cord blood blood
46 chr3:105541200-105543200 Enhancers Brain Substantia Nigra brain
47 chr3:105541200-105543200 Enhancers Skeletal Muscle Female skeletal muscle
48 chr3:105541200-105543400 Enhancers K562 blood
49 chr3:105541200-105543800 Strong transcription Fetal Muscle Leg muscle
50 chr3:105541400-105542800 Enhancers Primary T helper cells fromperipheralblood blood

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