Variant report

Variant	rs60624770
Chromosome Location	chr8:67881173-67881174
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:67880322..67883055-chr8:67884020..67886554,2	K562	blood:
2	chr8:67831807..67834984-chr8:67880444..67883286,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000254341	Chromatin interaction
ENSG00000245910	Chromatin interaction

Extended variants
information (count: 55 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:55)

rs_ID	r²[population]
rs1138476	0.96[EUR][1000 genomes]
rs11985037	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11988175	0.96[EUR][1000 genomes]
rs11989855	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11990088	0.96[EUR][1000 genomes]
rs11992626	0.96[EUR][1000 genomes]
rs11997189	0.80[AFR][1000 genomes];0.96[EUR][1000 genomes]
rs11997260	1.00[ASN][1000 genomes]
rs1466283	0.80[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs16933036	1.00[ASN][1000 genomes]
rs16933043	1.00[ASN][1000 genomes]
rs16933071	0.80[EUR][1000 genomes]
rs16933148	0.96[EUR][1000 genomes]
rs16933178	0.96[EUR][1000 genomes]
rs28377622	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4534119	1.00[ASN][1000 genomes]
rs55783506	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs55784133	1.00[ASN][1000 genomes]
rs56100064	0.86[ASN][1000 genomes]
rs56115408	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs56717011	0.80[EUR][1000 genomes]
rs56902031	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs57530222	0.83[AFR][1000 genomes];0.96[EUR][1000 genomes]
rs58160220	0.96[EUR][1000 genomes]
rs58307420	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs58416462	1.00[ASN][1000 genomes]
rs58787759	1.00[ASN][1000 genomes]
rs60167783	0.96[EUR][1000 genomes]
rs60964596	0.99[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61167401	1.00[ASN][1000 genomes]
rs61476700	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61552467	0.94[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6987665	1.00[ASN][1000 genomes]
rs7004549	0.83[AFR][1000 genomes];0.96[EUR][1000 genomes]
rs7009678	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs73691159	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73691161	0.99[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73691183	0.92[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73691187	0.87[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs73691188	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs73691189	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs73691190	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs73691191	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs73691194	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs73691597	1.00[ASN][1000 genomes]
rs73693106	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs73693110	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs73693114	0.83[AFR][1000 genomes];0.96[EUR][1000 genomes]
rs73693117	0.83[AFR][1000 genomes];0.96[EUR][1000 genomes]
rs73693129	0.81[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs73693136	0.80[EUR][1000 genomes]
rs73693149	0.80[EUR][1000 genomes]
rs73693150	0.80[EUR][1000 genomes]
rs73693151	0.80[EUR][1000 genomes]
rs7816746	0.80[AFR][1000 genomes];0.83[EUR][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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