The 2.0 version of rSNPBase

Variant report

Variant rs6074604
Chromosome Location chr20:13377378-13377379
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:13362800-13380600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr20:13363200-13377400 Weak transcription Fetal Brain Female brain
3 chr20:13364000-13377400 Weak transcription Brain Angular Gyrus brain
4 chr20:13364400-13415400 Weak transcription Right Ventricle heart
5 chr20:13364600-13379000 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr20:13364600-13416800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr20:13364800-13377600 Weak transcription Rectal Smooth Muscle rectum
8 chr20:13367200-13378400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr20:13368600-13378400 Weak transcription GM12878-XiMat blood
10 chr20:13368600-13382400 Weak transcription HMEC breast
11 chr20:13368600-13397400 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr20:13368800-13392200 Weak transcription Aorta Aorta
13 chr20:13369000-13411200 Strong transcription Dnd41 blood
14 chr20:13369400-13377400 Weak transcription Colon Smooth Muscle Colon
15 chr20:13369400-13377600 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr20:13369400-13380200 Weak transcription Psoas Muscle Psoas
17 chr20:13369400-13397000 Weak transcription Primary B cells from cord blood blood
18 chr20:13369400-13397200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr20:13369600-13397000 Weak transcription Fetal Thymus thymus
20 chr20:13370000-13378400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr20:13370000-13382400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr20:13371400-13413600 Weak transcription Ovary ovary
23 chr20:13371800-13397200 Weak transcription Primary T cells from cord blood blood
24 chr20:13372000-13382000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr20:13372000-13395800 Weak transcription HepG2 liver
26 chr20:13372000-13396400 Weak transcription Primary T helper cells fromperipheralblood blood
27 chr20:13372000-13397400 Weak transcription Primary B cells from peripheral blood blood
28 chr20:13372000-13397400 Weak transcription Left Ventricle heart
29 chr20:13372000-13397400 Weak transcription Thymus Thymus
30 chr20:13372200-13381400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr20:13374200-13380600 Weak transcription Spleen Spleen
32 chr20:13374200-13417200 Weak transcription Fetal Muscle Trunk muscle
33 chr20:13374400-13380400 Weak transcription Fetal Lung lung
34 chr20:13374400-13382400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr20:13374400-13382800 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr20:13374400-13384000 Weak transcription Pancreas Pancrea
37 chr20:13374400-13410800 Weak transcription Primary hematopoietic stem cells blood
38 chr20:13374600-13397400 Weak transcription Fetal Intestine Small intestine
39 chr20:13374600-13399400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr20:13374600-13405800 Weak transcription Fetal Stomach stomach
41 chr20:13375800-13377600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
42 chr20:13375800-13378800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr20:13375800-13379200 Enhancers HSMM muscle
44 chr20:13375800-13379400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
45 chr20:13376000-13379200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr20:13376400-13378800 Enhancers HSMMtube muscle
47 chr20:13376400-13379000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr20:13376600-13378400 Enhancers Stomach Smooth Muscle stomach
49 chr20:13376600-13378600 Enhancers Muscle Satellite Cultured Cells --
50 chr20:13376800-13377400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin

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Last update: Aug 31, 2015