Variant report
| Variant | rs60926179 |
|---|---|
| Chromosome Location | chr10:93680923-93680924 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:2 , 50 per page) page:
1
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000174721 | Chromatin interaction |
| ENSG00000272817 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:26)
| rs_ID | r2[population] |
|---|---|
| rs11186754 | 0.88[AFR][1000 genomes] |
| rs11186763 | 0.81[AFR][1000 genomes] |
| rs17107215 | 1.00[AMR][1000 genomes] |
| rs17107230 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs17107237 | 0.81[AFR][1000 genomes] |
| rs17107245 | 1.00[AMR][1000 genomes] |
| rs2421795 | 0.83[AFR][1000 genomes] |
| rs59490443 | 0.81[AFR][1000 genomes] |
| rs7074133 | 0.83[AFR][1000 genomes] |
| rs74149318 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs74149319 | 0.88[AFR][1000 genomes] |
| rs74149337 | 0.91[AFR][1000 genomes] |
| rs74149340 | 0.84[AFR][1000 genomes] |
| rs74149341 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs74149342 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs74149344 | 0.91[AFR][1000 genomes] |
| rs74149345 | 0.91[AFR][1000 genomes] |
| rs74149346 | 0.91[AFR][1000 genomes] |
| rs74149347 | 0.91[AFR][1000 genomes] |
| rs74149348 | 0.91[AFR][1000 genomes] |
| rs74149349 | 0.91[AFR][1000 genomes] |
| rs74149350 | 0.91[AFR][1000 genomes] |
| rs74149351 | 0.91[AFR][1000 genomes] |
| rs74149352 | 0.83[AFR][1000 genomes] |
| rs74149353 | 0.83[AFR][1000 genomes] |
| rs74149354 | 0.83[AFR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr10:93669400-93682800 | Weak transcription | Pancreas | Pancrea |
