Variant report

Variant	rs61014575
Chromosome Location	chr6:44684183-44684184
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs13212421	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13217105	0.94[ASN][1000 genomes]
rs1361725	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1482881	0.98[ASN][1000 genomes]
rs227826	0.98[ASN][1000 genomes]
rs34613807	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58195789	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs58953717	0.85[ASN][1000 genomes]
rs67120049	0.85[ASN][1000 genomes]
rs67220021	0.97[ASN][1000 genomes]
rs6904819	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6910103	0.98[ASN][1000 genomes]
rs6915967	0.98[ASN][1000 genomes]
rs6921829	0.94[ASN][1000 genomes]
rs6936338	0.85[ASN][1000 genomes]
rs7770230	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1817071	chr6:44670110-44698829	Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44667200-44691000	Weak transcription	Right Atrium	heart
2	chr6:44682400-44691000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr6:44684000-44684200	Bivalent Enhancer	Skeletal Muscle Male	skeletal muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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