Variant report

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs11883894	0.82[EUR][1000 genomes]
rs16859176	0.86[AMR][1000 genomes]
rs16859177	0.92[EUR][1000 genomes]
rs2356609	0.86[AMR][1000 genomes]
rs55644524	0.81[AMR][1000 genomes]
rs55885449	0.81[AMR][1000 genomes]
rs55939429	0.86[AMR][1000 genomes]
rs55991728	0.90[EUR][1000 genomes]
rs55995602	0.81[AMR][1000 genomes]
rs55997598	0.86[AMR][1000 genomes]
rs56004444	0.86[AMR][1000 genomes]
rs56134465	0.90[EUR][1000 genomes]
rs56155601	0.86[AMR][1000 genomes]
rs56243805	0.90[EUR][1000 genomes]
rs56267332	0.92[EUR][1000 genomes]
rs56308745	0.86[AMR][1000 genomes]
rs56934523	0.86[AMR][1000 genomes]
rs57335774	0.82[EUR][1000 genomes]
rs57733560	0.86[AMR][1000 genomes]
rs58685348	0.86[AMR][1000 genomes]
rs60091560	0.82[EUR][1000 genomes]
rs60396936	0.86[AMR][1000 genomes]
rs60730419	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6711423	0.92[EUR][1000 genomes]
rs6736045	0.86[AMR][1000 genomes]
rs6746133	0.81[AMR][1000 genomes]
rs73013465	0.92[EUR][1000 genomes]
rs73017249	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73017262	0.96[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73017268	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73017286	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs73976125	0.92[EUR][1000 genomes]
rs7580756	0.92[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9752051	0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv522291	chr2:172034918-172043803	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:172031600-172036800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr2:172031600-172036800	Weak transcription	NHEK	skin
3	chr2:172031600-172037000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr2:172035600-172037000	Enhancers	GM12878-XiMat	blood
5	chr2:172036000-172038000	Weak transcription	NHDF-Ad	bronchial
6	chr2:172036200-172037400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr2:172036400-172037200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr2:172036600-172037400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr2:172036600-172038600	Enhancers	Primary hematopoietic stem cells short term culture	blood

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