Variant report

No.	Distal block	Cell Line	Cell type
1	chr2:172028540..172030907-chr2:172040306..172041978,2	K562	blood:
2	chr2:172037922..172040353-chr2:172040710..172043498,2	MCF-7	breast:
3	chr2:172037115..172039035-chr2:172040563..172042289,2	K562	blood:

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs16859176	0.81[AMR][1000 genomes]
rs16859177	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs16859206	0.80[EUR][1000 genomes]
rs2356609	0.81[AMR][1000 genomes]
rs55939429	0.81[AMR][1000 genomes]
rs55991728	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs55995602	0.87[AMR][1000 genomes]
rs55997598	0.81[AMR][1000 genomes]
rs56004444	0.81[AMR][1000 genomes]
rs56134465	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs56155601	0.81[AMR][1000 genomes]
rs56216250	0.82[EUR][1000 genomes]
rs56243805	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs56267332	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs56308745	0.81[AMR][1000 genomes]
rs56934523	0.81[AMR][1000 genomes]
rs57733560	0.81[AMR][1000 genomes]
rs58685348	0.81[AMR][1000 genomes]
rs60396936	0.81[AMR][1000 genomes]
rs60730419	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs61105084	0.92[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6711423	0.88[EUR][1000 genomes]
rs6736045	0.81[AMR][1000 genomes]
rs73013465	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73017249	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs73017262	0.88[AFR][1000 genomes];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs73017268	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs73017286	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs73976125	0.88[EUR][1000 genomes]
rs9752051	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv522291	chr2:172034918-172043803	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:172037200-172041800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr2:172038400-172041800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr2:172038400-172042000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr2:172038600-172041600	Weak transcription	NHDF-Ad	bronchial
5	chr2:172038600-172041800	Weak transcription	Duodenum Smooth Muscle	Duodenum
6	chr2:172038800-172041800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr2:172038800-172042200	Weak transcription	NHEK	skin
8	chr2:172039000-172042000	Weak transcription	K562	blood
9	chr2:172040600-172042000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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