Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10441509	1.00[EUR][1000 genomes]
rs16879659	1.00[EUR][1000 genomes]
rs16879674	0.92[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16879693	0.92[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16879696	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16918465	1.00[EUR][1000 genomes]
rs1824191	1.00[EUR][1000 genomes]
rs2124979	1.00[EUR][1000 genomes]
rs56106062	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56810186	1.00[EUR][1000 genomes]
rs57080527	1.00[EUR][1000 genomes]
rs57175707	1.00[EUR][1000 genomes]
rs57556233	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57608746	1.00[EUR][1000 genomes]
rs58602890	0.92[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60917031	1.00[EUR][1000 genomes]
rs73700614	1.00[EUR][1000 genomes]
rs73700615	0.92[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73700627	1.00[EUR][1000 genomes]
rs73700631	1.00[EUR][1000 genomes]
rs73704014	1.00[EUR][1000 genomes]
rs73704021	1.00[EUR][1000 genomes]
rs73704027	1.00[EUR][1000 genomes]
rs73704033	1.00[EUR][1000 genomes]
rs73704041	1.00[EUR][1000 genomes]
rs73704044	0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018510	chr8:110403496-110504029	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
2	nsv891281	chr8:110450092-110558622	Weak transcription Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	15 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:110496600-110499400	Enhancers	HUES64 Cell Line	embryonic stem cell
2	chr8:110497400-110499200	Enhancers	HUES48 Cell Line	embryonic stem cell
3	chr8:110497400-110499400	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chr8:110497600-110499000	Enhancers	iPS-15b Cell Line	embryonic stem cell
5	chr8:110497600-110499200	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr8:110497800-110499200	Enhancers	HUES6 Cell Line	embryonic stem cell
7	chr8:110497800-110499200	Enhancers	iPS-20b Cell Line	embryonic stem cell
8	chr8:110498200-110498600	Weak transcription	H1 Cell Line	embryonic stem cell

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