Variant report

Variant	rs61284121
Chromosome Location	chr10:118176550-118176551
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs12265880	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs17094705	1.00[ASN][1000 genomes]
rs17094718	1.00[ASN][1000 genomes]
rs17094727	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs62641721	1.00[EUR][1000 genomes]
rs7094204	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs73377427	1.00[ASN][1000 genomes]
rs73377448	1.00[ASN][1000 genomes]
rs73381528	0.99[ASN][1000 genomes]
rs73381531	0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832001	chr10:118138370-118315059	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:118174000-118177600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
2	chr10:118175400-118176600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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