Variant report

Variant	rs7094204
Chromosome Location	chr10:118192125-118192126
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs12265880	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17094705	1.00[ASN][1000 genomes]
rs17094718	1.00[ASN][1000 genomes]
rs17094727	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs61284121	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs73377427	1.00[ASN][1000 genomes]
rs73377448	1.00[ASN][1000 genomes]
rs73381528	0.99[ASN][1000 genomes]
rs73381531	0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832001	chr10:118138370-118315059	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:118189600-118194800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr10:118190800-118197800	Genic enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr10:118191600-118216200	Weak transcription	Pancreas	Pancrea
4	chr10:118191800-118192200	Enhancers	NHEK	skin
5	chr10:118191800-118193000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr10:118191800-118193000	Weak transcription	HMEC	breast
7	chr10:118191800-118195600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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