Variant report

Variant	rs61285887
Chromosome Location	chr10:95566870-95566871
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs55747054	1.00[AMR][1000 genomes]
rs56988586	1.00[AMR][1000 genomes]
rs58891392	1.00[AMR][1000 genomes]
rs60325334	1.00[AMR][1000 genomes]
rs73314782	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73318405	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74150405	1.00[AMR][1000 genomes]
rs74150492	1.00[AMR][1000 genomes]
rs74150494	1.00[AMR][1000 genomes]
rs74150496	1.00[AMR][1000 genomes]
rs74153433	1.00[AMR][1000 genomes]
rs74153434	1.00[AMR][1000 genomes]
rs74153435	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv975815	chr10:95563645-95572587	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:95565400-95567400	Enhancers	Fetal Muscle Leg	muscle
2	chr10:95565400-95573800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
3	chr10:95565600-95572600	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr10:95566200-95567000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr10:95566200-95567200	Enhancers	Cortex derived primary cultured neurospheres	brain
6	chr10:95566600-95567000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr10:95566600-95567000	Enhancers	Rectal Mucosa Donor 31	rectum
8	chr10:95566600-95567000	Enhancers	Right Atrium	heart
9	chr10:95566600-95567800	Enhancers	Psoas Muscle	Psoas
10	chr10:95566600-95568600	Enhancers	HSMMtube	muscle
11	chr10:95566800-95567000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr10:95566800-95567000	Enhancers	Duodenum Mucosa	Duodenum
13	chr10:95566800-95567000	Enhancers	Skeletal Muscle Female	skeletal muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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