Variant report

Variant rs56988586
Chromosome Location chr10:95677067-95677068
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:95657400-95689200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr10:95668800-95679000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr10:95668800-95686000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr10:95669000-95689400 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr10:95673000-95687000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr10:95673200-95680800 Weak transcription Primary T cells from cord blood blood
7 chr10:95673800-95677600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr10:95675400-95678200 Enhancers Fetal Lung lung
9 chr10:95676200-95677200 Enhancers Fetal Brain Male brain
10 chr10:95676200-95677400 Enhancers Fetal Brain Female brain
11 chr10:95676400-95677200 Active TSS Pancreatic Islets Pancreatic Islet
12 chr10:95676600-95677200 Enhancers HUES6 Cell Line embryonic stem cell
13 chr10:95676600-95677200 Enhancers HUES64 Cell Line embryonic stem cell
14 chr10:95676600-95677200 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
15 chr10:95676600-95677200 Active TSS Fetal Intestine Large intestine
16 chr10:95676600-95677400 Enhancers HUES48 Cell Line embryonic stem cell
17 chr10:95676600-95677800 Enhancers Fetal Muscle Leg muscle
18 chr10:95676600-95678400 Enhancers A549 lung
19 chr10:95676600-95678600 Enhancers HSMMtube muscle
20 chr10:95676800-95677200 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
21 chr10:95676800-95677200 Flanking Active TSS Fetal Intestine Small intestine
22 chr10:95676800-95677600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
23 chr10:95676800-95677800 Enhancers Ovary ovary
24 chr10:95676800-95678000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr10:95676800-95678400 Enhancers HSMM muscle
26 chr10:95677000-95677200 Enhancers Primary hematopoietic stem cells blood
27 chr10:95677000-95677200 Flanking Active TSS Fetal Kidney kidney
28 chr10:95677000-95677200 Enhancers Stomach Smooth Muscle stomach
29 chr10:95677000-95677400 Enhancers Liver Liver
30 chr10:95677000-95677400 Enhancers Duodenum Mucosa Duodenum
31 chr10:95677000-95677400 Enhancers HepG2 liver
32 chr10:95677000-95678000 Enhancers Fetal Stomach stomach
33 chr10:95677000-95684400 Weak transcription Rectal Mucosa Donor 29 rectum

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