Variant report

Variant	rs74153434
Chromosome Location	chr10:95656739-95656740
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:95635910..95638109-chr10:95655615..95657317,2	MCF-7	breast:
2	chr10:95655267..95660464-chr10:95662376..95665623,6	K562	blood:
3	chr10:95655301..95659438-chr10:95663461..95667580,3	MCF-7	breast:
4	chr10:95647063..95650467-chr10:95654358..95657175,3	MCF-7	breast:
5	chr10:95650817..95655373-chr10:95655592..95660244,7	MCF-7	breast:

Variant related genes	Relation type
ENSG00000176273	Chromatin interaction

rs_ID	r²[population]
rs55747054	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56988586	1.00[AMR][1000 genomes]
rs57192135	1.00[AMR][1000 genomes]
rs58891392	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60325334	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61285887	1.00[AMR][1000 genomes]
rs73314782	1.00[AMR][1000 genomes]
rs73318405	1.00[AMR][1000 genomes]
rs74150405	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74150492	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74150494	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74150496	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74151031	1.00[AMR][1000 genomes]
rs74151032	1.00[AMR][1000 genomes]
rs74151034	1.00[AMR][1000 genomes]
rs74151035	1.00[AMR][1000 genomes]
rs74153433	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74153435	1.00[AMR][1000 genomes]

Chromatin state (count:91 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:95654400-95660600	Weak transcription	Aorta	Aorta
2	chr10:95654600-95657200	Weak transcription	Small Intestine	intestine
3	chr10:95654800-95660600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr10:95654800-95664600	Weak transcription	Gastric	stomach
5	chr10:95654800-95667800	Weak transcription	Fetal Muscle Trunk	muscle
6	chr10:95654800-95671400	Weak transcription	NH-A	brain
7	chr10:95654800-95673600	Weak transcription	NHDF-Ad	bronchial
8	chr10:95654800-95676200	Weak transcription	Fetal Kidney	kidney
9	chr10:95654800-95676800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr10:95654800-95677000	Weak transcription	Primary hematopoietic stem cells	blood
11	chr10:95655000-95656800	Weak transcription	Lung	lung
12	chr10:95655000-95656800	Weak transcription	Pancreas	Pancrea
13	chr10:95655000-95656800	Weak transcription	Rectal Mucosa Donor 31	rectum
14	chr10:95655000-95657200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
15	chr10:95655000-95657400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
16	chr10:95655000-95659200	Weak transcription	Left Ventricle	heart
17	chr10:95655000-95660400	Weak transcription	HSMM	muscle
18	chr10:95655000-95660600	Weak transcription	Primary T cells fromperipheralblood	blood
19	chr10:95655000-95662600	Weak transcription	Esophagus	oesophagus
20	chr10:95655000-95664000	Weak transcription	HUVEC	blood vessel
21	chr10:95655000-95665200	Weak transcription	NHEK	skin
22	chr10:95655000-95666000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
23	chr10:95655000-95666800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
24	chr10:95655000-95667000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
25	chr10:95655000-95668000	Weak transcription	Skeletal Muscle Male	skeletal muscle
26	chr10:95655000-95668200	Weak transcription	Brain Angular Gyrus	brain
27	chr10:95655000-95671000	Weak transcription	Skeletal Muscle Female	skeletal muscle
28	chr10:95655000-95672800	Weak transcription	Psoas Muscle	Psoas
29	chr10:95655000-95674600	Weak transcription	Monocytes-CD14+_RO01746	blood
30	chr10:95655000-95676600	Weak transcription	Fetal Stomach	stomach
31	chr10:95655200-95657000	Enhancers	Primary T cells from cord blood	blood
32	chr10:95655200-95657000	Enhancers	Primary T regulatory cells fromperipheralblood	blood
33	chr10:95655200-95657200	Weak transcription	Right Atrium	heart
34	chr10:95655200-95657400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
35	chr10:95655200-95657400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
36	chr10:95655200-95657400	Weak transcription	Fetal Brain Male	brain
37	chr10:95655200-95660600	Weak transcription	HSMMtube	muscle
38	chr10:95655200-95662400	Weak transcription	Rectal Smooth Muscle	rectum
39	chr10:95655200-95665600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
40	chr10:95655200-95666800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
41	chr10:95655200-95667000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
42	chr10:95655200-95667600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
43	chr10:95655200-95668800	Weak transcription	Colonic Mucosa	Colon
44	chr10:95655200-95673400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
45	chr10:95655200-95673400	Weak transcription	Muscle Satellite Cultured Cells	--
46	chr10:95655200-95676200	Weak transcription	Cortex derived primary cultured neurospheres	brain
47	chr10:95655200-95676200	Weak transcription	Fetal Heart	heart
48	chr10:95655200-95676400	Weak transcription	Stomach Smooth Muscle	stomach
49	chr10:95655200-95676600	Weak transcription	Brain Hippocampus Middle	brain
50	chr10:95655400-95659400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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