Variant report

Variant	rs73318405
Chromosome Location	chr10:95565585-95565586
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs55747054	1.00[AMR][1000 genomes]
rs56988586	1.00[AMR][1000 genomes]
rs58891392	1.00[AMR][1000 genomes]
rs60325334	1.00[AMR][1000 genomes]
rs61285887	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73314782	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74150405	1.00[AMR][1000 genomes]
rs74150492	1.00[AMR][1000 genomes]
rs74150494	1.00[AMR][1000 genomes]
rs74150496	1.00[AMR][1000 genomes]
rs74153433	1.00[AMR][1000 genomes]
rs74153434	1.00[AMR][1000 genomes]
rs74153435	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv975815	chr10:95563645-95572587	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:95557400-95566600	Weak transcription	Brain Anterior Caudate	brain
2	chr10:95563600-95565600	Enhancers	HUES64 Cell Line	embryonic stem cell
3	chr10:95564400-95566600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr10:95564400-95566600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr10:95564400-95566800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr10:95564600-95566200	Weak transcription	Cortex derived primary cultured neurospheres	brain
7	chr10:95565000-95565800	Weak transcription	HUES48 Cell Line	embryonic stem cell
8	chr10:95565400-95565600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
9	chr10:95565400-95567400	Enhancers	Fetal Muscle Leg	muscle
10	chr10:95565400-95573800	Weak transcription	iPS-15b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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