Variant report

Variant	rs61309343
Chromosome Location	chr6:121831638-121831639
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs1535824	1.00[EUR][1000 genomes]
rs17083625	1.00[EUR][1000 genomes]
rs57110992	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59599989	1.00[EUR][1000 genomes]
rs6915013	1.00[EUR][1000 genomes]
rs73534403	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73534407	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73534426	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73767029	1.00[EUR][1000 genomes]
rs73767042	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9482164	1.00[EUR][1000 genomes]
rs9490256	1.00[EUR][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:121828400-121831800	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr6:121828600-121831800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr6:121828600-121831800	Weak transcription	A549	lung
4	chr6:121828600-121841200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr6:121829200-121836600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr6:121829400-121831800	Weak transcription	Hela-S3	cervix
7	chr6:121830000-121832400	Enhancers	HUVEC	blood vessel
8	chr6:121830400-121832200	Enhancers	Osteobl	bone
9	chr6:121830600-121836600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr6:121830600-121843200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr6:121831000-121831800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr6:121831200-121832000	Enhancers	HMEC	breast
13	chr6:121831400-121833000	Enhancers	Breast Myoepithelial Primary Cells	Breast
14	chr6:121831600-121832000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr6:121831600-121832000	Enhancers	NH-A	brain
16	chr6:121831600-121832400	Enhancers	Fetal Adrenal Gland	Adrenal Gland

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links