The 2.0 version of rSNPBase

Variant report

Variant rs61498471
Chromosome Location chr15:55596705-55596706
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:55582600-55601400 Weak transcription Lung lung
2 chr15:55583000-55596800 Weak transcription Primary B cells from cord blood blood
3 chr15:55583000-55597000 Weak transcription Fetal Stomach stomach
4 chr15:55583200-55597000 Weak transcription Fetal Lung lung
5 chr15:55583200-55597200 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr15:55583200-55603000 Weak transcription Placenta Amnion Placenta Amnion
7 chr15:55583200-55603400 Weak transcription Rectal Smooth Muscle rectum
8 chr15:55583200-55604400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
9 chr15:55583200-55610400 Weak transcription Pancreas Pancrea
10 chr15:55583400-55604400 Weak transcription A549 lung
11 chr15:55584800-55597000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr15:55590000-55604600 Weak transcription K562 blood
13 chr15:55590200-55596800 Weak transcription Monocytes-CD14+_RO01746 blood
14 chr15:55590200-55597200 Weak transcription Primary monocytes fromperipheralblood blood
15 chr15:55590600-55597800 Weak transcription Primary neutrophils fromperipheralblood blood
16 chr15:55591800-55603600 Weak transcription Ovary ovary
17 chr15:55592600-55602000 Weak transcription Spleen Spleen
18 chr15:55593400-55598800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr15:55593400-55603800 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr15:55593800-55596800 Weak transcription Fetal Kidney kidney
21 chr15:55593800-55597000 Weak transcription Primary B cells from peripheral blood blood
22 chr15:55593800-55597000 Weak transcription Fetal Muscle Trunk muscle
23 chr15:55593800-55604800 Weak transcription Brain Inferior Temporal Lobe brain
24 chr15:55593800-55605200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr15:55594000-55597000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr15:55594000-55597000 Weak transcription Adipose Nuclei Adipose
27 chr15:55594000-55598400 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr15:55594400-55597200 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr15:55594400-55597200 Weak transcription Fetal Intestine Small intestine
30 chr15:55594400-55599400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr15:55594400-55603400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
32 chr15:55594400-55604800 Weak transcription Brain Substantia Nigra brain
33 chr15:55594600-55597200 Weak transcription Primary hematopoietic stem cells blood
34 chr15:55594600-55602400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr15:55594800-55597200 Weak transcription Primary T cells from cord blood blood
36 chr15:55594800-55603200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr15:55594800-55603600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr15:55594800-55603600 Weak transcription Primary T regulatory cells fromperipheralblood blood
39 chr15:55594800-55603600 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr15:55594800-55604000 Weak transcription Right Ventricle heart
41 chr15:55595000-55597200 Weak transcription Thymus Thymus
42 chr15:55595000-55602600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr15:55595000-55603200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr15:55595000-55603200 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr15:55595000-55603400 Weak transcription Brain Hippocampus Middle brain
46 chr15:55595000-55603600 Weak transcription Primary T helper cells PMA-I stimulated --
47 chr15:55595200-55598000 Weak transcription Brain Germinal Matrix brain
48 chr15:55595200-55598800 Weak transcription Left Ventricle heart
49 chr15:55595200-55603000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr15:55595400-55599200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015