The 2.0 version of rSNPBase

Variant report

Variant rs61786697
Chromosome Location chr1:98513959-98513960
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:98509600-98514600 Active TSS Brain Angular Gyrus brain
2 chr1:98512000-98514400 Weak transcription Right Atrium heart
3 chr1:98512200-98514000 Weak transcription NH-A brain
4 chr1:98512200-98514200 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
5 chr1:98512200-98514200 Weak transcription HSMMtube muscle
6 chr1:98512200-98515000 Bivalent/Poised TSS Fetal Brain Female brain
7 chr1:98512200-98515200 Active TSS Brain Inferior Temporal Lobe brain
8 chr1:98512400-98514000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr1:98512400-98514000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr1:98512400-98514000 Weak transcription Muscle Satellite Cultured Cells --
11 chr1:98512400-98514000 Weak transcription HMEC breast
12 chr1:98512400-98514000 Weak transcription HUVEC blood vessel
13 chr1:98512400-98514000 Weak transcription Osteobl bone
14 chr1:98512400-98514400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr1:98512400-98514800 Active TSS Brain Anterior Caudate brain
16 chr1:98512600-98514000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr1:98512600-98514000 Weak transcription NHDF-Ad bronchial
18 chr1:98512600-98514600 Active TSS Fetal Brain Male brain
19 chr1:98513000-98514000 Weak transcription A549 lung
20 chr1:98513000-98515400 Bivalent/Poised TSS Fetal Intestine Large intestine
21 chr1:98513200-98514600 Active TSS Brain Cingulate Gyrus brain
22 chr1:98513400-98514000 Enhancers Dnd41 blood
23 chr1:98513400-98514400 Active TSS Brain Dorsolateral Prefrontal Cortex brain
24 chr1:98513600-98514000 Enhancers Cortex derived primary cultured neurospheres brain
25 chr1:98513600-98514200 Active TSS Fetal Adrenal Gland Adrenal Gland
26 chr1:98513600-98514400 Active TSS NHLF lung
27 chr1:98513600-98514600 Active TSS Brain Hippocampus Middle brain
28 chr1:98513800-98514000 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr1:98513800-98514000 Bivalent Enhancer Primary neutrophils fromperipheralblood blood
30 chr1:98513800-98514000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
31 chr1:98513800-98514000 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
32 chr1:98513800-98514200 Flanking Bivalent TSS/Enh Brain Germinal Matrix brain
33 chr1:98513800-98514400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
34 chr1:98513800-98515000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
35 chr1:98513800-98515200 Bivalent Enhancer Primary T cells fromperipheralblood blood
36 chr1:98513800-98515400 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
37 chr1:98513800-98515400 Bivalent/Poised TSS Fetal Intestine Small intestine
38 chr1:98513800-98515600 Active TSS HSMM muscle

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Last update: Aug 31, 2015