The 2.0 version of rSNPBase

Variant report

Variant rs2660304
Chromosome Location chr1:98512127-98512128
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:98509600-98514600 Active TSS Brain Angular Gyrus brain
2 chr1:98510000-98512400 Bivalent/Poised TSS Brain Anterior Caudate brain
3 chr1:98510200-98512200 Bivalent Enhancer Primary T helper memory cells from peripheral blood 2 blood
4 chr1:98510200-98512400 Active TSS HSMM muscle
5 chr1:98510400-98512200 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
6 chr1:98510400-98512200 Bivalent Enhancer Primary B cells from peripheral blood blood
7 chr1:98510400-98512200 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells blood
8 chr1:98510400-98512200 Bivalent Enhancer Primary T helper memory cells from peripheral blood 1 blood
9 chr1:98510400-98512200 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr1:98510600-98512200 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
11 chr1:98510600-98512200 Active TSS HSMMtube muscle
12 chr1:98510800-98512200 Bivalent/Poised TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr1:98510800-98512200 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
14 chr1:98510800-98512200 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
15 chr1:98510800-98512200 Bivalent/Poised TSS Brain Substantia Nigra brain
16 chr1:98510800-98512200 Active TSS A549 lung
17 chr1:98510800-98512400 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
18 chr1:98511000-98512200 Bivalent/Poised TSS Brain Dorsolateral Prefrontal Cortex brain
19 chr1:98511000-98512400 Active TSS HUVEC blood vessel
20 chr1:98511400-98512200 Bivalent/Poised TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr1:98511400-98512200 Flanking Bivalent TSS/Enh Brain Hippocampus Middle brain
22 chr1:98511400-98512600 Bivalent/Poised TSS Fetal Brain Male brain
23 chr1:98511600-98512200 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
24 chr1:98511600-98512200 Bivalent/Poised TSS Brain Inferior Temporal Lobe brain
25 chr1:98511800-98512200 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr1:98511800-98512200 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
27 chr1:98511800-98512200 Flanking Bivalent TSS/Enh HUES48 Cell Line embryonic stem cell
28 chr1:98511800-98512200 Flanking Bivalent TSS/Enh iPS-20b Cell Line embryonic stem cell
29 chr1:98511800-98512200 Bivalent Enhancer iPS DF 19.11 Cell Line embryonic stem cell
30 chr1:98511800-98512200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr1:98511800-98512200 Bivalent Enhancer Breast Myoepithelial Primary Cells Breast
32 chr1:98511800-98512200 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr1:98511800-98512200 Bivalent Enhancer Primary T cells fromperipheralblood blood
34 chr1:98511800-98512200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
35 chr1:98511800-98512200 Flanking Bivalent TSS/Enh Brain Germinal Matrix brain
36 chr1:98511800-98512200 Bivalent/Poised TSS Fetal Adrenal Gland Adrenal Gland
37 chr1:98511800-98512200 Bivalent Enhancer Fetal Thymus thymus
38 chr1:98511800-98512200 Bivalent Enhancer Left Ventricle heart
39 chr1:98511800-98512200 Enhancers Pancreas Pancrea
40 chr1:98511800-98512200 Flanking Bivalent TSS/Enh Dnd41 blood
41 chr1:98511800-98512200 Flanking Active TSS NH-A brain
42 chr1:98511800-98512200 Flanking Bivalent TSS/Enh NHEK skin
43 chr1:98511800-98512400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr1:98512000-98512200 Bivalent Enhancer H1 Cell Line embryonic stem cell
45 chr1:98512000-98512200 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr1:98512000-98512200 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
47 chr1:98512000-98512200 Bivalent Enhancer Primary hematopoietic stem cells short term culture blood
48 chr1:98512000-98512200 Bivalent Enhancer Primary T helper naive cells fromperipheralblood blood
49 chr1:98512000-98512200 Bivalent/Poised TSS Primary T helper cells PMA-I stimulated --
50 chr1:98512000-98512200 Flanking Bivalent TSS/Enh Primary T helper 17 cells PMA-I stimulated --

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Last update: Aug 31, 2015