The 2.0 version of rSNPBase

Variant report

Variant rs4394694
Chromosome Location chr1:98371449-98371450
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:98364600-98377200 Weak transcription Primary T cells fromperipheralblood blood
2 chr1:98367000-98375800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
3 chr1:98367200-98373200 Enhancers NHDF-Ad bronchial
4 chr1:98367400-98382200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr1:98368000-98376800 Weak transcription Primary T cells from cord blood blood
6 chr1:98368000-98377000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr1:98368000-98384000 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr1:98368600-98376000 Weak transcription Dnd41 blood
9 chr1:98368600-98377000 Weak transcription Primary T helper naive cells fromperipheralblood blood
10 chr1:98369200-98372200 Enhancers NH-A brain
11 chr1:98369400-98372000 Enhancers Brain Hippocampus Middle brain
12 chr1:98369600-98373600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr1:98369800-98371600 Weak transcription Psoas Muscle Psoas
14 chr1:98369800-98372200 Weak transcription HSMMtube muscle
15 chr1:98369800-98373000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
16 chr1:98369800-98373600 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr1:98369800-98384000 Weak transcription Right Atrium heart
18 chr1:98370000-98372400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr1:98370000-98373400 Weak transcription Adipose Nuclei Adipose
20 chr1:98370000-98376000 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr1:98370200-98371600 Weak transcription Brain Inferior Temporal Lobe brain
22 chr1:98370200-98371600 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr1:98370200-98372000 Weak transcription HSMM muscle
24 chr1:98370200-98372200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr1:98370200-98372200 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr1:98370200-98372200 Enhancers Muscle Satellite Cultured Cells --
27 chr1:98370200-98372200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr1:98370200-98372400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr1:98370200-98375800 Enhancers Primary neutrophils fromperipheralblood blood
30 chr1:98370200-98379600 Enhancers Primary monocytes fromperipheralblood blood
31 chr1:98370400-98371600 Weak transcription HUVEC blood vessel
32 chr1:98370400-98372200 Weak transcription Primary T helper cells PMA-I stimulated --
33 chr1:98370400-98372200 Weak transcription Brain Anterior Caudate brain
34 chr1:98370400-98372600 Enhancers Primary B cells from cord blood blood
35 chr1:98370400-98377200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr1:98370600-98372000 Weak transcription Osteobl bone
37 chr1:98370600-98372200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr1:98370800-98371600 Enhancers Liver Liver
39 chr1:98370800-98372200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr1:98370800-98372200 Weak transcription Hela-S3 cervix
41 chr1:98370800-98372200 Weak transcription HMEC breast
42 chr1:98370800-98374400 Weak transcription Primary T regulatory cells fromperipheralblood blood
43 chr1:98371000-98371800 Enhancers Primary hematopoietic stem cells blood
44 chr1:98371200-98371600 Enhancers Primary T helper cells fromperipheralblood blood
45 chr1:98371200-98371800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
46 chr1:98371200-98377400 Weak transcription Brain Substantia Nigra brain
47 chr1:98371200-98382400 Weak transcription Brain Angular Gyrus brain
48 chr1:98371200-98383200 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr1:98371400-98371800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr1:98371400-98376800 Weak transcription Primary T helper naive cells from peripheral blood blood

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Last update: Aug 31, 2015