The 2.0 version of rSNPBase

Variant report

Variant rs61787785
Chromosome Location chr1:98332523-98332524
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:98303200-98351000 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr1:98309400-98367200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr1:98311600-98337800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr1:98311800-98350400 Weak transcription Stomach Smooth Muscle stomach
5 chr1:98312200-98344400 Weak transcription Fetal Intestine Small intestine
6 chr1:98315600-98337200 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr1:98316400-98346400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr1:98316400-98348000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr1:98316400-98349200 Weak transcription NHDF-Ad bronchial
10 chr1:98320800-98346400 Weak transcription Primary T cells fromperipheralblood blood
11 chr1:98320800-98351800 Weak transcription Esophagus oesophagus
12 chr1:98321000-98351800 Weak transcription Left Ventricle heart
13 chr1:98323400-98345800 Weak transcription Liver Liver
14 chr1:98323400-98351800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr1:98323600-98334600 Weak transcription Primary monocytes fromperipheralblood blood
16 chr1:98330400-98333000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr1:98330400-98351600 Weak transcription Brain Substantia Nigra brain
18 chr1:98330600-98332800 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr1:98330800-98333000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr1:98330800-98336000 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr1:98330800-98341800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr1:98330800-98343600 Weak transcription Thymus Thymus
23 chr1:98330800-98345400 Weak transcription Osteobl bone
24 chr1:98330800-98346400 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr1:98330800-98346600 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr1:98330800-98351800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
27 chr1:98331400-98334600 Weak transcription Psoas Muscle Psoas
28 chr1:98331400-98346200 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr1:98331600-98348600 Strong transcription Monocytes-CD14+_RO01746 blood
30 chr1:98331800-98335200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr1:98332000-98345600 Weak transcription HSMM muscle
32 chr1:98332200-98333000 Strong transcription Primary T cells from cord blood blood
33 chr1:98332200-98333200 Enhancers Primary T helper naive cells from peripheral blood blood
34 chr1:98332200-98337600 Weak transcription Dnd41 blood

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Last update: Aug 31, 2015