The 2.0 version of rSNPBase

Variant report

Variant rs61787819
Chromosome Location chr1:98344088-98344089
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:98303200-98351000 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr1:98309400-98367200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr1:98311800-98350400 Weak transcription Stomach Smooth Muscle stomach
4 chr1:98312200-98344400 Weak transcription Fetal Intestine Small intestine
5 chr1:98316400-98346400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr1:98316400-98348000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr1:98316400-98349200 Weak transcription NHDF-Ad bronchial
8 chr1:98320800-98346400 Weak transcription Primary T cells fromperipheralblood blood
9 chr1:98320800-98351800 Weak transcription Esophagus oesophagus
10 chr1:98321000-98351800 Weak transcription Left Ventricle heart
11 chr1:98323400-98345800 Weak transcription Liver Liver
12 chr1:98323400-98351800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr1:98330400-98351600 Weak transcription Brain Substantia Nigra brain
14 chr1:98330800-98345400 Weak transcription Osteobl bone
15 chr1:98330800-98346400 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr1:98330800-98346600 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr1:98330800-98351800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
18 chr1:98331400-98346200 Weak transcription Primary T helper cells fromperipheralblood blood
19 chr1:98331600-98348600 Strong transcription Monocytes-CD14+_RO01746 blood
20 chr1:98332000-98345600 Weak transcription HSMM muscle
21 chr1:98333200-98351600 Weak transcription Primary hematopoietic stem cells short term culture blood
22 chr1:98333200-98353400 Weak transcription Fetal Lung lung
23 chr1:98333400-98344200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr1:98333400-98346600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
25 chr1:98333400-98351600 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr1:98335200-98345800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr1:98335400-98349000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr1:98336200-98350600 Weak transcription Brain Cingulate Gyrus brain
29 chr1:98336200-98352600 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr1:98336400-98349800 Weak transcription Brain Inferior Temporal Lobe brain
31 chr1:98337600-98354200 Weak transcription Fetal Thymus thymus
32 chr1:98337800-98351800 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr1:98338800-98345800 Weak transcription Primary T regulatory cells fromperipheralblood blood
34 chr1:98339600-98351800 Weak transcription Spleen Spleen
35 chr1:98339800-98351800 Weak transcription Small Intestine intestine
36 chr1:98340200-98349800 Weak transcription Fetal Intestine Large intestine
37 chr1:98341000-98351400 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr1:98341000-98351800 Weak transcription Brain Anterior Caudate brain
39 chr1:98341200-98351600 Weak transcription Aorta Aorta
40 chr1:98341400-98345200 Weak transcription Primary neutrophils fromperipheralblood blood
41 chr1:98341400-98349800 Weak transcription Brain Hippocampus Middle brain
42 chr1:98341600-98349000 Strong transcription Primary monocytes fromperipheralblood blood
43 chr1:98341800-98349000 Strong transcription Dnd41 blood
44 chr1:98342200-98344400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr1:98342200-98345800 Weak transcription Primary B cells from cord blood blood
46 chr1:98342400-98351600 Weak transcription NH-A brain
47 chr1:98342600-98344600 Strong transcription Primary hematopoietic stem cells blood
48 chr1:98342800-98348600 Weak transcription Brain Angular Gyrus brain
49 chr1:98342800-98351600 Weak transcription Ovary ovary
50 chr1:98343000-98346400 Weak transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015