The 2.0 version of rSNPBase

Variant report

Variant rs4246515
Chromosome Location chr1:98381437-98381438
allele A/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:98367400-98382200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
2 chr1:98368000-98384000 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr1:98369800-98384000 Weak transcription Right Atrium heart
4 chr1:98371200-98382400 Weak transcription Brain Angular Gyrus brain
5 chr1:98371200-98383200 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr1:98372600-98383000 Weak transcription Primary B cells from cord blood blood
7 chr1:98373200-98383800 Weak transcription Hela-S3 cervix
8 chr1:98373200-98384400 Weak transcription NH-A brain
9 chr1:98373400-98382200 Weak transcription Liver Liver
10 chr1:98373600-98383400 Weak transcription HUVEC blood vessel
11 chr1:98373600-98384400 Weak transcription A549 lung
12 chr1:98375600-98382200 Weak transcription Brain Hippocampus Middle brain
13 chr1:98377200-98382200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr1:98377400-98383000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr1:98377400-98383000 Weak transcription Muscle Satellite Cultured Cells --
16 chr1:98377600-98382200 Weak transcription Osteobl bone
17 chr1:98377600-98382400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr1:98377600-98382400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr1:98377600-98385000 Weak transcription Primary T cells fromperipheralblood blood
20 chr1:98377800-98382200 Weak transcription Primary hematopoietic stem cells blood
21 chr1:98377800-98382200 Weak transcription Primary hematopoietic stem cells short term culture blood
22 chr1:98377800-98382200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr1:98377800-98382800 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr1:98377800-98383400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr1:98377800-98383400 Weak transcription Thymus Thymus
26 chr1:98377800-98383800 Weak transcription Fetal Thymus thymus
27 chr1:98377800-98385400 Weak transcription Small Intestine intestine
28 chr1:98378000-98382000 Enhancers Monocytes-CD14+_RO01746 blood
29 chr1:98378000-98383000 Enhancers Dnd41 blood
30 chr1:98378000-98383200 Weak transcription Primary T killer naive cells fromperipheralblood blood
31 chr1:98378000-98383800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr1:98378600-98382200 Weak transcription Primary T cells from cord blood blood
33 chr1:98378600-98383200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr1:98378800-98382200 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr1:98378800-98382600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr1:98379000-98382400 Weak transcription Primary T helper cells PMA-I stimulated --
37 chr1:98379000-98382800 Weak transcription Primary T killer memory cells from peripheral blood blood
38 chr1:98379600-98381800 Weak transcription Primary monocytes fromperipheralblood blood
39 chr1:98379800-98382400 Weak transcription HMEC breast
40 chr1:98380200-98383000 Weak transcription Brain Anterior Caudate brain
41 chr1:98380400-98383200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr1:98380600-98383400 Weak transcription Fetal Lung lung
43 chr1:98380800-98382000 Weak transcription Primary T helper cells fromperipheralblood blood
44 chr1:98380800-98383000 Weak transcription Brain Substantia Nigra brain
45 chr1:98381200-98382200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
46 chr1:98381200-98382400 Weak transcription Primary T helper naive cells fromperipheralblood blood
47 chr1:98381400-98381600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr1:98381400-98384600 Enhancers Brain Cingulate Gyrus brain
49 chr1:98381400-98385000 Enhancers Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015