The 2.0 version of rSNPBase

Variant report

Variant rs61819573
Chromosome Location chr1:214601327-214601328
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214572600-214612600 Weak transcription Fetal Intestine Small intestine
2 chr1:214576800-214612200 Weak transcription Fetal Intestine Large intestine
3 chr1:214584200-214603000 Weak transcription Fetal Adrenal Gland Adrenal Gland
4 chr1:214591400-214612800 Weak transcription Pancreas Pancrea
5 chr1:214591600-214601400 Weak transcription Lung lung
6 chr1:214592000-214602200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:214593200-214613000 Weak transcription Fetal Muscle Leg muscle
8 chr1:214593400-214602400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr1:214593400-214612800 Weak transcription Ovary ovary
10 chr1:214594000-214618000 Weak transcription Stomach Smooth Muscle stomach
11 chr1:214595400-214602400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr1:214595400-214612800 Weak transcription Aorta Aorta
13 chr1:214596000-214614000 Weak transcription Right Ventricle heart
14 chr1:214596600-214602400 Enhancers HMEC breast
15 chr1:214596600-214603400 Enhancers NHEK skin
16 chr1:214596800-214612800 Weak transcription Left Ventricle heart
17 chr1:214597200-214604200 Weak transcription Placenta Amnion Placenta Amnion
18 chr1:214598200-214601600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
19 chr1:214598200-214601600 Enhancers Primary hematopoietic stem cells short term culture blood
20 chr1:214598200-214603400 Enhancers HSMM muscle
21 chr1:214598200-214603400 Enhancers Osteobl bone
22 chr1:214598400-214602600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr1:214598600-214603800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
24 chr1:214598800-214602600 Enhancers Primary hematopoietic stem cells blood
25 chr1:214599000-214602800 Enhancers HUES64 Cell Line embryonic stem cell
26 chr1:214599000-214603600 Enhancers NHLF lung
27 chr1:214599400-214602400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
28 chr1:214599400-214604000 Weak transcription Fetal Brain Male brain
29 chr1:214599600-214603000 Enhancers Primary T killer memory cells from peripheral blood blood
30 chr1:214599800-214602400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr1:214600000-214601600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr1:214600200-214602400 Enhancers Thymus Thymus
33 chr1:214600200-214612800 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr1:214600800-214601800 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr1:214600800-214601800 Enhancers HUES6 Cell Line embryonic stem cell
36 chr1:214600800-214601800 Enhancers iPS-20b Cell Line embryonic stem cell
37 chr1:214600800-214601800 Enhancers Primary B cells from peripheral blood blood
38 chr1:214600800-214602000 Enhancers Primary neutrophils fromperipheralblood blood
39 chr1:214600800-214602000 Enhancers HSMMtube muscle
40 chr1:214600800-214602200 Enhancers Primary monocytes fromperipheralblood blood
41 chr1:214600800-214602200 Enhancers Fetal Thymus thymus
42 chr1:214600800-214602400 Flanking Active TSS Dnd41 blood
43 chr1:214600800-214602800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
44 chr1:214600800-214603200 Enhancers Primary T helper cells PMA-I stimulated --
45 chr1:214600800-214604000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr1:214601000-214601400 Enhancers Adipose Nuclei Adipose
47 chr1:214601000-214601400 Flanking Active TSS NH-A brain
48 chr1:214601000-214601600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
49 chr1:214601000-214601600 Enhancers iPS-15b Cell Line embryonic stem cell
50 chr1:214601000-214601600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell

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Last update: Aug 31, 2015