The 2.0 version of rSNPBase

Variant report

Variant rs35646913
Chromosome Location chr1:214595468-214595469
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214572600-214612600 Weak transcription Fetal Intestine Small intestine
2 chr1:214575200-214595800 Weak transcription Fetal Kidney kidney
3 chr1:214576800-214612200 Weak transcription Fetal Intestine Large intestine
4 chr1:214581400-214601200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr1:214584200-214603000 Weak transcription Fetal Adrenal Gland Adrenal Gland
6 chr1:214584400-214600000 Weak transcription Fetal Muscle Trunk muscle
7 chr1:214584800-214595800 Weak transcription A549 lung
8 chr1:214590400-214595600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr1:214590800-214595800 Enhancers HMEC breast
10 chr1:214591400-214612800 Weak transcription Pancreas Pancrea
11 chr1:214591600-214596200 Enhancers NHEK skin
12 chr1:214591600-214596400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr1:214591600-214598400 Weak transcription Adipose Nuclei Adipose
14 chr1:214591600-214600400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr1:214591600-214601200 Weak transcription Gastric stomach
16 chr1:214591600-214601400 Weak transcription Lung lung
17 chr1:214592000-214600200 Enhancers Breast Myoepithelial Primary Cells Breast
18 chr1:214592000-214602200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr1:214592200-214595600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr1:214593000-214598400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr1:214593200-214613000 Weak transcription Fetal Muscle Leg muscle
22 chr1:214593400-214595600 Weak transcription H9 Cell Line embryonic stem cell
23 chr1:214593400-214602400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr1:214593400-214612800 Weak transcription Ovary ovary
25 chr1:214593600-214596200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr1:214593600-214596400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr1:214593800-214595800 Weak transcription ES-WA7 Cell Line embryonic stem cell
28 chr1:214593800-214598600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr1:214594000-214596000 Weak transcription Fetal Heart heart
30 chr1:214594000-214596400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:214594000-214598400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr1:214594000-214618000 Weak transcription Stomach Smooth Muscle stomach
33 chr1:214594200-214595800 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr1:214594200-214596000 Weak transcription HUES64 Cell Line embryonic stem cell
35 chr1:214594200-214596000 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr1:214594200-214596800 Enhancers NHLF lung
37 chr1:214594400-214595600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr1:214594400-214596000 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr1:214594400-214596800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
40 chr1:214594400-214598600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr1:214594600-214596000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr1:214594600-214596000 Weak transcription HUES48 Cell Line embryonic stem cell
43 chr1:214594600-214596000 Enhancers Muscle Satellite Cultured Cells --
44 chr1:214594600-214596200 Weak transcription iPS-18 Cell Line embryonic stem cell
45 chr1:214594800-214595800 Weak transcription ES-I3 Cell Line embryonic stem cell
46 chr1:214594800-214597200 Enhancers Placenta Amnion Placenta Amnion
47 chr1:214595000-214595800 Enhancers Skeletal Muscle Female skeletal muscle
48 chr1:214595000-214596000 Enhancers NH-A brain
49 chr1:214595000-214596400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr1:214595000-214596800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015