The 2.0 version of rSNPBase

Variant report

Variant rs61819596
Chromosome Location chr1:214622645-214622646
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214601600-214625200 Weak transcription Esophagus oesophagus
2 chr1:214601600-214633000 Weak transcription Gastric stomach
3 chr1:214611800-214623200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr1:214613000-214649400 Weak transcription Lung lung
5 chr1:214613200-214628400 Weak transcription Ovary ovary
6 chr1:214613200-214633400 Weak transcription Pancreas Pancrea
7 chr1:214616400-214625200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr1:214618800-214626600 Weak transcription Left Ventricle heart
9 chr1:214618800-214627800 Weak transcription Fetal Heart heart
10 chr1:214618800-214628000 Weak transcription Aorta Aorta
11 chr1:214618800-214628000 Weak transcription Stomach Smooth Muscle stomach
12 chr1:214618800-214628200 Weak transcription Right Ventricle heart
13 chr1:214619400-214625000 Weak transcription H9 Cell Line embryonic stem cell
14 chr1:214619400-214626400 Weak transcription ES-WA7 Cell Line embryonic stem cell
15 chr1:214619400-214628400 Weak transcription Thymus Thymus
16 chr1:214620000-214637400 Weak transcription Fetal Brain Male brain
17 chr1:214620600-214628200 Weak transcription Fetal Thymus thymus
18 chr1:214620800-214624600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr1:214620800-214625400 Weak transcription Brain Inferior Temporal Lobe brain
20 chr1:214620800-214626200 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr1:214620800-214626200 Weak transcription Psoas Muscle Psoas
22 chr1:214620800-214636800 Weak transcription Adipose Nuclei Adipose
23 chr1:214620800-214637800 Weak transcription Fetal Muscle Trunk muscle
24 chr1:214621000-214623000 Enhancers HUES64 Cell Line embryonic stem cell
25 chr1:214621000-214625400 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr1:214621000-214625600 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr1:214621000-214626600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr1:214621000-214628200 Weak transcription Placenta Placenta
29 chr1:214621000-214639800 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr1:214621200-214622800 Weak transcription HUES6 Cell Line embryonic stem cell
31 chr1:214621200-214622800 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr1:214621200-214623200 Weak transcription Fetal Stomach stomach
33 chr1:214621200-214625000 Weak transcription Colon Smooth Muscle Colon
34 chr1:214621200-214625000 Weak transcription Fetal Muscle Leg muscle
35 chr1:214621200-214625800 Weak transcription Brain Substantia Nigra brain
36 chr1:214621200-214626600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
37 chr1:214621200-214627600 Weak transcription Rectal Smooth Muscle rectum
38 chr1:214621200-214633400 Weak transcription Fetal Kidney kidney
39 chr1:214621200-214633600 Weak transcription Fetal Intestine Small intestine
40 chr1:214621400-214622800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr1:214621400-214623000 Enhancers A549 lung
42 chr1:214621400-214625000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr1:214621400-214633400 Weak transcription HepG2 liver
44 chr1:214621600-214622800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr1:214621600-214624000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr1:214621600-214625400 Weak transcription HSMMtube muscle
47 chr1:214621600-214633600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr1:214621800-214624800 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr1:214621800-214625400 Weak transcription NHLF lung
50 chr1:214622000-214623200 Genic enhancers HMEC breast

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Last update: Aug 31, 2015