The 2.0 version of rSNPBase

Variant report

Variant rs61819630
Chromosome Location chr1:214647190-214647191
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214613000-214649400 Weak transcription Lung lung
2 chr1:214638200-214647400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:214638200-214649200 Weak transcription Aorta Aorta
4 chr1:214638400-214649000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:214638400-214649400 Weak transcription Right Ventricle heart
6 chr1:214640200-214647400 Weak transcription Fetal Kidney kidney
7 chr1:214640200-214649400 Weak transcription Placenta Placenta
8 chr1:214640200-214650000 Weak transcription Fetal Lung lung
9 chr1:214640400-214649400 Weak transcription Pancreas Pancrea
10 chr1:214640800-214648000 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr1:214640800-214649000 Weak transcription H1 Cell Line embryonic stem cell
12 chr1:214640800-214649400 Weak transcription Ovary ovary
13 chr1:214640800-214649400 Weak transcription Right Atrium heart
14 chr1:214640800-214649600 Weak transcription Fetal Muscle Leg muscle
15 chr1:214640800-214650200 Weak transcription Rectal Smooth Muscle rectum
16 chr1:214641400-214667800 Weak transcription Hela-S3 cervix
17 chr1:214644400-214648400 Enhancers HMEC breast
18 chr1:214644400-214650800 Enhancers iPS-20b Cell Line embryonic stem cell
19 chr1:214644600-214647800 Enhancers Muscle Satellite Cultured Cells --
20 chr1:214644600-214649400 Enhancers ES-I3 Cell Line embryonic stem cell
21 chr1:214644600-214649600 Enhancers Breast Myoepithelial Primary Cells Breast
22 chr1:214644600-214651400 Enhancers HUES64 Cell Line embryonic stem cell
23 chr1:214644800-214647400 Enhancers Placenta Amnion Placenta Amnion
24 chr1:214644800-214649000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr1:214644800-214650600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr1:214644800-214651000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr1:214645000-214647200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr1:214645000-214647400 Weak transcription Fetal Intestine Small intestine
29 chr1:214645000-214648600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr1:214645000-214651800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:214645200-214647400 Weak transcription H9 Cell Line embryonic stem cell
32 chr1:214645200-214647800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:214645200-214656600 Weak transcription Fetal Intestine Large intestine
34 chr1:214645400-214647800 Enhancers Skeletal Muscle Male skeletal muscle
35 chr1:214645400-214648800 Weak transcription Primary neutrophils fromperipheralblood blood
36 chr1:214645600-214647200 Enhancers NHLF lung
37 chr1:214645600-214647400 Enhancers HSMM muscle
38 chr1:214645600-214649000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr1:214645800-214647800 Enhancers NHDF-Ad bronchial
40 chr1:214645800-214648200 Enhancers Osteobl bone
41 chr1:214645800-214648800 Weak transcription Esophagus oesophagus
42 chr1:214645800-214648800 Enhancers NHEK skin
43 chr1:214645800-214649000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr1:214645800-214649200 Enhancers NH-A brain
45 chr1:214645800-214649400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
46 chr1:214645800-214649400 Weak transcription Left Ventricle heart
47 chr1:214645800-214649600 Enhancers HUES6 Cell Line embryonic stem cell
48 chr1:214645800-214666000 Weak transcription Fetal Muscle Trunk muscle
49 chr1:214646000-214647200 Flanking Active TSS A549 lung
50 chr1:214646000-214648200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015