The 2.0 version of rSNPBase

Variant report

Variant rs17732539
Chromosome Location chr1:214612603-214612604
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214591400-214612800 Weak transcription Pancreas Pancrea
2 chr1:214593200-214613000 Weak transcription Fetal Muscle Leg muscle
3 chr1:214593400-214612800 Weak transcription Ovary ovary
4 chr1:214594000-214618000 Weak transcription Stomach Smooth Muscle stomach
5 chr1:214595400-214612800 Weak transcription Aorta Aorta
6 chr1:214596000-214614000 Weak transcription Right Ventricle heart
7 chr1:214596800-214612800 Weak transcription Left Ventricle heart
8 chr1:214600200-214612800 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr1:214601400-214612800 Weak transcription Adipose Nuclei Adipose
10 chr1:214601600-214625200 Weak transcription Esophagus oesophagus
11 chr1:214601600-214633000 Weak transcription Gastric stomach
12 chr1:214601800-214613000 Weak transcription Stomach Mucosa stomach
13 chr1:214602800-214617600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr1:214604000-214617600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr1:214604600-214612800 Weak transcription NHDF-Ad bronchial
16 chr1:214604600-214613000 Weak transcription NHLF lung
17 chr1:214610400-214612800 Enhancers Primary hematopoietic stem cells blood
18 chr1:214610400-214615800 Enhancers HUVEC blood vessel
19 chr1:214610400-214620600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr1:214610600-214617000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr1:214610800-214612800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr1:214611000-214612800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
23 chr1:214611000-214613000 Enhancers Fetal Adrenal Gland Adrenal Gland
24 chr1:214611000-214613200 Enhancers Breast Myoepithelial Primary Cells Breast
25 chr1:214611000-214614200 Enhancers iPS-20b Cell Line embryonic stem cell
26 chr1:214611200-214612800 Enhancers ES-I3 Cell Line embryonic stem cell
27 chr1:214611200-214612800 Enhancers HUES6 Cell Line embryonic stem cell
28 chr1:214611200-214612800 Weak transcription Rectal Smooth Muscle rectum
29 chr1:214611200-214613000 Enhancers HSMM muscle
30 chr1:214611200-214615400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr1:214611400-214612800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
32 chr1:214611400-214612800 Enhancers Primary hematopoietic stem cells short term culture blood
33 chr1:214611400-214612800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
34 chr1:214611400-214612800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr1:214611400-214612800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
36 chr1:214611400-214615000 Enhancers Fetal Thymus thymus
37 chr1:214611600-214612800 Weak transcription H9 Cell Line embryonic stem cell
38 chr1:214611600-214612800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
39 chr1:214611600-214613200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr1:214611600-214614400 Enhancers Primary T helper cells fromperipheralblood blood
41 chr1:214611600-214615800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr1:214611600-214616200 Enhancers ES-WA7 Cell Line embryonic stem cell
43 chr1:214611600-214616200 Enhancers iPS-15b Cell Line embryonic stem cell
44 chr1:214611600-214619200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr1:214611600-214620400 Enhancers HUES64 Cell Line embryonic stem cell
46 chr1:214611800-214612800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr1:214611800-214612800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
48 chr1:214611800-214612800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
49 chr1:214611800-214612800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
50 chr1:214611800-214612800 Weak transcription Placenta Placenta

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Last update: Aug 31, 2015