The 2.0 version of rSNPBase

Variant report

Variant rs61819637
Chromosome Location chr1:214649221-214649222
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214613000-214649400 Weak transcription Lung lung
2 chr1:214638400-214649400 Weak transcription Right Ventricle heart
3 chr1:214640200-214649400 Weak transcription Placenta Placenta
4 chr1:214640200-214650000 Weak transcription Fetal Lung lung
5 chr1:214640400-214649400 Weak transcription Pancreas Pancrea
6 chr1:214640800-214649400 Weak transcription Ovary ovary
7 chr1:214640800-214649400 Weak transcription Right Atrium heart
8 chr1:214640800-214649600 Weak transcription Fetal Muscle Leg muscle
9 chr1:214640800-214650200 Weak transcription Rectal Smooth Muscle rectum
10 chr1:214641400-214667800 Weak transcription Hela-S3 cervix
11 chr1:214644400-214650800 Enhancers iPS-20b Cell Line embryonic stem cell
12 chr1:214644600-214649400 Enhancers ES-I3 Cell Line embryonic stem cell
13 chr1:214644600-214649600 Enhancers Breast Myoepithelial Primary Cells Breast
14 chr1:214644600-214651400 Enhancers HUES64 Cell Line embryonic stem cell
15 chr1:214644800-214650600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr1:214644800-214651000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr1:214645000-214651800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr1:214645200-214656600 Weak transcription Fetal Intestine Large intestine
19 chr1:214645800-214649400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
20 chr1:214645800-214649400 Weak transcription Left Ventricle heart
21 chr1:214645800-214649600 Enhancers HUES6 Cell Line embryonic stem cell
22 chr1:214645800-214666000 Weak transcription Fetal Muscle Trunk muscle
23 chr1:214646000-214672200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr1:214646200-214650600 Enhancers iPS-18 Cell Line embryonic stem cell
25 chr1:214646200-214651000 Enhancers iPS-15b Cell Line embryonic stem cell
26 chr1:214646200-214651800 Enhancers HUES48 Cell Line embryonic stem cell
27 chr1:214647000-214649400 Enhancers HUVEC blood vessel
28 chr1:214647200-214649600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr1:214647200-214649800 Weak transcription NHLF lung
30 chr1:214647200-214661600 Weak transcription Fetal Adrenal Gland Adrenal Gland
31 chr1:214647400-214650000 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr1:214647400-214650200 Enhancers H9 Cell Line embryonic stem cell
33 chr1:214647400-214651200 Enhancers Psoas Muscle Psoas
34 chr1:214647600-214649400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr1:214647600-214650800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr1:214647800-214650600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr1:214647800-214650600 Weak transcription Fetal Kidney kidney
38 chr1:214647800-214651000 Enhancers Placenta Amnion Placenta Amnion
39 chr1:214648000-214650400 Weak transcription Fetal Heart heart
40 chr1:214648000-214651000 Enhancers Stomach Mucosa stomach
41 chr1:214648000-214651800 Enhancers A549 lung
42 chr1:214648000-214669400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr1:214648200-214649800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr1:214648200-214649800 Enhancers HSMM muscle
45 chr1:214648200-214650800 Weak transcription Fetal Intestine Small intestine
46 chr1:214648400-214649400 Weak transcription ES-WA7 Cell Line embryonic stem cell
47 chr1:214648400-214651000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
48 chr1:214648800-214649800 Enhancers Muscle Satellite Cultured Cells --
49 chr1:214648800-214650000 Enhancers Primary neutrophils fromperipheralblood blood
50 chr1:214648800-214650400 Flanking Active TSS NHEK skin

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Last update: Aug 31, 2015