The 2.0 version of rSNPBase

Variant report

Variant rs61819629
Chromosome Location chr1:214645757-214645758
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214613000-214649400 Weak transcription Lung lung
2 chr1:214634400-214646200 Weak transcription iPS-18 Cell Line embryonic stem cell
3 chr1:214638200-214645800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr1:214638200-214647400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr1:214638200-214649200 Weak transcription Aorta Aorta
6 chr1:214638400-214649000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr1:214638400-214649400 Weak transcription Right Ventricle heart
8 chr1:214638600-214646800 Weak transcription Fetal Adrenal Gland Adrenal Gland
9 chr1:214640200-214646600 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr1:214640200-214647400 Weak transcription Fetal Kidney kidney
11 chr1:214640200-214649400 Weak transcription Placenta Placenta
12 chr1:214640200-214650000 Weak transcription Fetal Lung lung
13 chr1:214640400-214649400 Weak transcription Pancreas Pancrea
14 chr1:214640800-214645800 Weak transcription NH-A brain
15 chr1:214640800-214645800 Weak transcription NHDF-Ad bronchial
16 chr1:214640800-214648000 Weak transcription ES-WA7 Cell Line embryonic stem cell
17 chr1:214640800-214649000 Weak transcription H1 Cell Line embryonic stem cell
18 chr1:214640800-214649400 Weak transcription Ovary ovary
19 chr1:214640800-214649400 Weak transcription Right Atrium heart
20 chr1:214640800-214649600 Weak transcription Fetal Muscle Leg muscle
21 chr1:214640800-214650200 Weak transcription Rectal Smooth Muscle rectum
22 chr1:214641200-214646000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr1:214641200-214646600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr1:214641400-214647000 Weak transcription Colon Smooth Muscle Colon
25 chr1:214641400-214667800 Weak transcription Hela-S3 cervix
26 chr1:214642800-214646800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr1:214643000-214646600 Weak transcription Fetal Heart heart
28 chr1:214643200-214646600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr1:214644400-214646000 Enhancers A549 lung
30 chr1:214644400-214648400 Enhancers HMEC breast
31 chr1:214644400-214650800 Enhancers iPS-20b Cell Line embryonic stem cell
32 chr1:214644600-214645800 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr1:214644600-214647000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr1:214644600-214647800 Enhancers Muscle Satellite Cultured Cells --
35 chr1:214644600-214649400 Enhancers ES-I3 Cell Line embryonic stem cell
36 chr1:214644600-214649600 Enhancers Breast Myoepithelial Primary Cells Breast
37 chr1:214644600-214651400 Enhancers HUES64 Cell Line embryonic stem cell
38 chr1:214644800-214646000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr1:214644800-214646000 Enhancers Psoas Muscle Psoas
40 chr1:214644800-214646200 Weak transcription iPS-15b Cell Line embryonic stem cell
41 chr1:214644800-214647400 Enhancers Placenta Amnion Placenta Amnion
42 chr1:214644800-214649000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr1:214644800-214650600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr1:214644800-214651000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr1:214645000-214645800 Genic enhancers Osteobl bone
46 chr1:214645000-214646000 Enhancers Skeletal Muscle Female skeletal muscle
47 chr1:214645000-214646800 Weak transcription HepG2 liver
48 chr1:214645000-214647200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr1:214645000-214647400 Weak transcription Fetal Intestine Small intestine
50 chr1:214645000-214648600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015