Variant report

Variant	rs61819623
Chromosome Location	chr1:214644271-214644272
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs10157143	0.85[AFR][1000 genomes]
rs10158378	0.91[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs10158490	0.94[AFR][1000 genomes];0.96[EUR][1000 genomes]
rs10159086	0.94[AFR][1000 genomes];0.96[EUR][1000 genomes]
rs10159464	0.94[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs17790515	0.94[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs17790562	0.94[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs56156299	0.85[AFR][1000 genomes]
rs57880156	0.91[EUR][1000 genomes]
rs58530653	0.94[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs60798187	0.94[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs61745825	0.90[EUR][1000 genomes]
rs61819600	0.91[EUR][1000 genomes]
rs61819616	0.94[AFR][1000 genomes];0.96[EUR][1000 genomes]
rs61819617	0.94[AFR][1000 genomes];0.96[EUR][1000 genomes]
rs61819618	0.94[AFR][1000 genomes];0.96[EUR][1000 genomes]
rs61819620	0.88[AFR][1000 genomes];0.96[EUR][1000 genomes]
rs61819621	0.96[EUR][1000 genomes]
rs61819622	0.94[AFR][1000 genomes];0.96[EUR][1000 genomes]
rs61819624	0.81[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs61819625	0.94[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs61819627	0.94[AFR][1000 genomes];0.96[EUR][1000 genomes]
rs61819628	0.94[AFR][1000 genomes];0.96[EUR][1000 genomes]
rs61819629	0.96[EUR][1000 genomes]
rs61819630	0.94[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs61819631	0.94[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs61819632	0.94[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs61819637	0.91[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs61819638	0.94[EUR][1000 genomes]
rs61819640	0.93[EUR][1000 genomes]
rs61819641	0.93[EUR][1000 genomes]
rs61819642	0.93[EUR][1000 genomes]
rs61819644	0.89[EUR][1000 genomes]
rs74139884	0.88[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs74139885	0.88[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs74139887	0.94[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs74139888	0.94[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs74139889	0.94[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs74142708	0.85[AFR][1000 genomes]

No data

Chromatin state (count:69 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:214613000-214649400	Weak transcription	Lung	lung
2	chr1:214625800-214644800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr1:214629200-214644800	Weak transcription	Psoas Muscle	Psoas
4	chr1:214634400-214644400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr1:214634400-214645000	Weak transcription	HUVEC	blood vessel
6	chr1:214634400-214646200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
7	chr1:214635800-214645000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr1:214637200-214645000	Weak transcription	Esophagus	oesophagus
9	chr1:214638200-214644400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
10	chr1:214638200-214644400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr1:214638200-214645400	Weak transcription	Left Ventricle	heart
12	chr1:214638200-214645600	Weak transcription	Fetal Muscle Trunk	muscle
13	chr1:214638200-214645800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
14	chr1:214638200-214647400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
15	chr1:214638200-214649200	Weak transcription	Aorta	Aorta
16	chr1:214638400-214644600	Weak transcription	HSMM	muscle
17	chr1:214638400-214649000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
18	chr1:214638400-214649400	Weak transcription	Right Ventricle	heart
19	chr1:214638600-214646800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
20	chr1:214640200-214644800	Weak transcription	H9 Cell Line	embryonic stem cell
21	chr1:214640200-214646600	Weak transcription	Duodenum Smooth Muscle	Duodenum
22	chr1:214640200-214647400	Weak transcription	Fetal Kidney	kidney
23	chr1:214640200-214649400	Weak transcription	Placenta	Placenta
24	chr1:214640200-214650000	Weak transcription	Fetal Lung	lung
25	chr1:214640400-214644800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
26	chr1:214640400-214644800	Weak transcription	Stomach Mucosa	stomach
27	chr1:214640400-214645000	Weak transcription	Adipose Nuclei	Adipose
28	chr1:214640400-214649400	Weak transcription	Pancreas	Pancrea
29	chr1:214640800-214644600	Weak transcription	Muscle Satellite Cultured Cells	--
30	chr1:214640800-214644600	Weak transcription	Fetal Intestine Large	intestine
31	chr1:214640800-214644600	Weak transcription	Fetal Intestine Small	intestine
32	chr1:214640800-214644800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
33	chr1:214640800-214644800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
34	chr1:214640800-214644800	Weak transcription	Placenta Amnion	Placenta Amnion
35	chr1:214640800-214644800	Weak transcription	Skeletal Muscle Male	skeletal muscle
36	chr1:214640800-214645000	Weak transcription	Skeletal Muscle Female	skeletal muscle
37	chr1:214640800-214645200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
38	chr1:214640800-214645400	Weak transcription	HSMMtube	muscle
39	chr1:214640800-214645600	Weak transcription	NHLF	lung
40	chr1:214640800-214645800	Weak transcription	NH-A	brain
41	chr1:214640800-214645800	Weak transcription	NHDF-Ad	bronchial
42	chr1:214640800-214648000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
43	chr1:214640800-214649000	Weak transcription	H1 Cell Line	embryonic stem cell
44	chr1:214640800-214649400	Weak transcription	Ovary	ovary
45	chr1:214640800-214649400	Weak transcription	Right Atrium	heart
46	chr1:214640800-214649600	Weak transcription	Fetal Muscle Leg	muscle
47	chr1:214640800-214650200	Weak transcription	Rectal Smooth Muscle	rectum
48	chr1:214641000-214644600	Weak transcription	HUES48 Cell Line	embryonic stem cell
49	chr1:214641200-214644600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
50	chr1:214641200-214646000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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