The 2.0 version of rSNPBase

Variant report

Variant rs57880156
Chromosome Location chr1:214631478-214631479
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214601600-214633000 Weak transcription Gastric stomach
2 chr1:214613000-214649400 Weak transcription Lung lung
3 chr1:214613200-214633400 Weak transcription Pancreas Pancrea
4 chr1:214620000-214637400 Weak transcription Fetal Brain Male brain
5 chr1:214620800-214636800 Weak transcription Adipose Nuclei Adipose
6 chr1:214620800-214637800 Weak transcription Fetal Muscle Trunk muscle
7 chr1:214621000-214639800 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr1:214621200-214633400 Weak transcription Fetal Kidney kidney
9 chr1:214621200-214633600 Weak transcription Fetal Intestine Small intestine
10 chr1:214621400-214633400 Weak transcription HepG2 liver
11 chr1:214621600-214633600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr1:214624000-214634600 Weak transcription Fetal Stomach stomach
13 chr1:214624600-214633800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr1:214625800-214633400 Enhancers Breast Myoepithelial Primary Cells Breast
15 chr1:214625800-214636800 Weak transcription Esophagus oesophagus
16 chr1:214625800-214644800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr1:214626000-214633200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr1:214627000-214633400 Weak transcription H1 Cell Line embryonic stem cell
19 chr1:214627000-214635000 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr1:214627200-214640000 Weak transcription ES-WA7 Cell Line embryonic stem cell
21 chr1:214628400-214636800 Weak transcription Stomach Smooth Muscle stomach
22 chr1:214628600-214636800 Weak transcription Aorta Aorta
23 chr1:214628600-214636800 Weak transcription Fetal Muscle Leg muscle
24 chr1:214628600-214637600 Weak transcription Ovary ovary
25 chr1:214628600-214637800 Weak transcription H9 Cell Line embryonic stem cell
26 chr1:214628600-214637800 Weak transcription Placenta Placenta
27 chr1:214628600-214640600 Weak transcription Right Atrium heart
28 chr1:214628800-214631600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr1:214628800-214631800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr1:214628800-214632600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr1:214628800-214632600 Enhancers HUVEC blood vessel
32 chr1:214628800-214633400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr1:214628800-214633800 Weak transcription HUES48 Cell Line embryonic stem cell
34 chr1:214628800-214633800 Weak transcription iPS-15b Cell Line embryonic stem cell
35 chr1:214628800-214633800 Weak transcription iPS-18 Cell Line embryonic stem cell
36 chr1:214628800-214636800 Weak transcription Placenta Amnion Placenta Amnion
37 chr1:214628800-214639400 Weak transcription Stomach Mucosa stomach
38 chr1:214629000-214632000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr1:214629000-214632400 Enhancers Osteobl bone
40 chr1:214629000-214633200 Weak transcription HUES64 Cell Line embryonic stem cell
41 chr1:214629000-214635400 Weak transcription HSMMtube muscle
42 chr1:214629000-214637800 Weak transcription Right Ventricle heart
43 chr1:214629200-214632200 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr1:214629200-214633000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr1:214629200-214633400 Weak transcription iPS-20b Cell Line embryonic stem cell
46 chr1:214629200-214633400 Weak transcription HSMM muscle
47 chr1:214629200-214633600 Weak transcription HUES6 Cell Line embryonic stem cell
48 chr1:214629200-214635200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr1:214629200-214644800 Weak transcription Psoas Muscle Psoas
50 chr1:214629400-214635600 Weak transcription NHLF lung

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Last update: Aug 31, 2015