The 2.0 version of rSNPBase

Variant report

Variant rs61819590
Chromosome Location chr1:214603528-214603529
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214572600-214612600 Weak transcription Fetal Intestine Small intestine
2 chr1:214576800-214612200 Weak transcription Fetal Intestine Large intestine
3 chr1:214591400-214612800 Weak transcription Pancreas Pancrea
4 chr1:214593200-214613000 Weak transcription Fetal Muscle Leg muscle
5 chr1:214593400-214612800 Weak transcription Ovary ovary
6 chr1:214594000-214618000 Weak transcription Stomach Smooth Muscle stomach
7 chr1:214595400-214612800 Weak transcription Aorta Aorta
8 chr1:214596000-214614000 Weak transcription Right Ventricle heart
9 chr1:214596800-214612800 Weak transcription Left Ventricle heart
10 chr1:214597200-214604200 Weak transcription Placenta Amnion Placenta Amnion
11 chr1:214598600-214603800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
12 chr1:214599000-214603600 Enhancers NHLF lung
13 chr1:214599400-214604000 Weak transcription Fetal Brain Male brain
14 chr1:214600200-214612800 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr1:214600800-214604000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr1:214601400-214612800 Weak transcription Adipose Nuclei Adipose
17 chr1:214601600-214604200 Enhancers HUVEC blood vessel
18 chr1:214601600-214604600 Enhancers NHDF-Ad bronchial
19 chr1:214601600-214605000 Weak transcription Psoas Muscle Psoas
20 chr1:214601600-214605200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr1:214601600-214611600 Weak transcription iPS-15b Cell Line embryonic stem cell
22 chr1:214601600-214625200 Weak transcription Esophagus oesophagus
23 chr1:214601600-214633000 Weak transcription Gastric stomach
24 chr1:214601800-214605200 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr1:214601800-214611200 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr1:214601800-214612200 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr1:214601800-214613000 Weak transcription Stomach Mucosa stomach
28 chr1:214602000-214604400 Enhancers Primary T cells from cord blood blood
29 chr1:214602000-214612600 Weak transcription HSMMtube muscle
30 chr1:214602400-214603800 Enhancers Dnd41 blood
31 chr1:214602400-214611000 Weak transcription Thymus Thymus
32 chr1:214602400-214611800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr1:214602600-214609200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr1:214602600-214611400 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr1:214602800-214617600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr1:214603000-214603600 Enhancers A549 lung
37 chr1:214603000-214603800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr1:214603000-214604400 Enhancers Fetal Adrenal Gland Adrenal Gland
39 chr1:214603000-214609400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr1:214603200-214603800 Enhancers HMEC breast
41 chr1:214603400-214603600 Flanking Active TSS Muscle Satellite Cultured Cells --
42 chr1:214603400-214603600 Genic enhancers HSMM muscle
43 chr1:214603400-214603600 Flanking Active TSS NH-A brain
44 chr1:214603400-214603800 Enhancers ES-I3 Cell Line embryonic stem cell
45 chr1:214603400-214603800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr1:214603400-214603800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
47 chr1:214603400-214603800 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr1:214603400-214604000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
49 chr1:214603400-214604000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
50 chr1:214603400-214604000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015