The 2.0 version of rSNPBase

Variant report

Variant rs61819594
Chromosome Location chr1:214617849-214617850
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214594000-214618000 Weak transcription Stomach Smooth Muscle stomach
2 chr1:214601600-214625200 Weak transcription Esophagus oesophagus
3 chr1:214601600-214633000 Weak transcription Gastric stomach
4 chr1:214610400-214620600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:214611600-214619200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr1:214611600-214620400 Enhancers HUES64 Cell Line embryonic stem cell
7 chr1:214611800-214618000 Weak transcription Right Atrium heart
8 chr1:214611800-214620400 Weak transcription Fetal Muscle Trunk muscle
9 chr1:214611800-214623200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr1:214613000-214619800 Weak transcription Fetal Brain Male brain
11 chr1:214613000-214649400 Weak transcription Lung lung
12 chr1:214613200-214618400 Weak transcription Left Ventricle heart
13 chr1:214613200-214620600 Enhancers ES-I3 Cell Line embryonic stem cell
14 chr1:214613200-214620600 Enhancers HUES6 Cell Line embryonic stem cell
15 chr1:214613200-214628400 Weak transcription Ovary ovary
16 chr1:214613200-214633400 Weak transcription Pancreas Pancrea
17 chr1:214613400-214618000 Weak transcription Adipose Nuclei Adipose
18 chr1:214613400-214620200 Weak transcription Brain Angular Gyrus brain
19 chr1:214613600-214618000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr1:214613600-214618200 Weak transcription Colonic Mucosa Colon
21 chr1:214613600-214618600 Weak transcription Placenta Placenta
22 chr1:214613600-214619000 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr1:214613600-214619200 Weak transcription Brain Anterior Caudate brain
24 chr1:214613600-214619400 Weak transcription Brain Substantia Nigra brain
25 chr1:214613600-214620600 Weak transcription Fetal Lung lung
26 chr1:214614200-214619200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr1:214614200-214619200 Weak transcription Fetal Kidney kidney
28 chr1:214614400-214618000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr1:214614400-214618000 Weak transcription Brain Hippocampus Middle brain
30 chr1:214614400-214618000 Weak transcription Brain Inferior Temporal Lobe brain
31 chr1:214614400-214618000 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr1:214614400-214620400 Weak transcription Fetal Intestine Small intestine
33 chr1:214614600-214618400 Genic enhancers NHEK skin
34 chr1:214614600-214619200 Weak transcription Stomach Mucosa stomach
35 chr1:214614600-214619600 Weak transcription Brain Cingulate Gyrus brain
36 chr1:214614600-214619800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr1:214614800-214618000 Weak transcription Psoas Muscle Psoas
38 chr1:214614800-214618000 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr1:214614800-214618000 Weak transcription Rectal Smooth Muscle rectum
40 chr1:214614800-214618400 Weak transcription Right Ventricle heart
41 chr1:214614800-214620000 Weak transcription HepG2 liver
42 chr1:214614800-214620200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr1:214615000-214618000 Weak transcription Fetal Thymus thymus
44 chr1:214615000-214618400 Weak transcription Thymus Thymus
45 chr1:214615200-214618000 Weak transcription Aorta Aorta
46 chr1:214615200-214618400 Weak transcription H9 Cell Line embryonic stem cell
47 chr1:214615400-214618000 Weak transcription H1 Cell Line embryonic stem cell
48 chr1:214615400-214618000 Weak transcription Dnd41 blood
49 chr1:214615600-214618200 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr1:214615800-214618600 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015