The 2.0 version of rSNPBase

Variant report

Variant rs60798187
Chromosome Location chr1:214648541-214648542
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214613000-214649400 Weak transcription Lung lung
2 chr1:214638200-214649200 Weak transcription Aorta Aorta
3 chr1:214638400-214649000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr1:214638400-214649400 Weak transcription Right Ventricle heart
5 chr1:214640200-214649400 Weak transcription Placenta Placenta
6 chr1:214640200-214650000 Weak transcription Fetal Lung lung
7 chr1:214640400-214649400 Weak transcription Pancreas Pancrea
8 chr1:214640800-214649000 Weak transcription H1 Cell Line embryonic stem cell
9 chr1:214640800-214649400 Weak transcription Ovary ovary
10 chr1:214640800-214649400 Weak transcription Right Atrium heart
11 chr1:214640800-214649600 Weak transcription Fetal Muscle Leg muscle
12 chr1:214640800-214650200 Weak transcription Rectal Smooth Muscle rectum
13 chr1:214641400-214667800 Weak transcription Hela-S3 cervix
14 chr1:214644400-214650800 Enhancers iPS-20b Cell Line embryonic stem cell
15 chr1:214644600-214649400 Enhancers ES-I3 Cell Line embryonic stem cell
16 chr1:214644600-214649600 Enhancers Breast Myoepithelial Primary Cells Breast
17 chr1:214644600-214651400 Enhancers HUES64 Cell Line embryonic stem cell
18 chr1:214644800-214649000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr1:214644800-214650600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr1:214644800-214651000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr1:214645000-214648600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr1:214645000-214651800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr1:214645200-214656600 Weak transcription Fetal Intestine Large intestine
24 chr1:214645400-214648800 Weak transcription Primary neutrophils fromperipheralblood blood
25 chr1:214645600-214649000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:214645800-214648800 Weak transcription Esophagus oesophagus
27 chr1:214645800-214648800 Enhancers NHEK skin
28 chr1:214645800-214649000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr1:214645800-214649200 Enhancers NH-A brain
30 chr1:214645800-214649400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
31 chr1:214645800-214649400 Weak transcription Left Ventricle heart
32 chr1:214645800-214649600 Enhancers HUES6 Cell Line embryonic stem cell
33 chr1:214645800-214666000 Weak transcription Fetal Muscle Trunk muscle
34 chr1:214646000-214672200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr1:214646200-214650600 Enhancers iPS-18 Cell Line embryonic stem cell
36 chr1:214646200-214651000 Enhancers iPS-15b Cell Line embryonic stem cell
37 chr1:214646200-214651800 Enhancers HUES48 Cell Line embryonic stem cell
38 chr1:214647000-214649400 Enhancers HUVEC blood vessel
39 chr1:214647200-214649600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr1:214647200-214649800 Weak transcription NHLF lung
41 chr1:214647200-214661600 Weak transcription Fetal Adrenal Gland Adrenal Gland
42 chr1:214647400-214650000 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr1:214647400-214650200 Enhancers H9 Cell Line embryonic stem cell
44 chr1:214647400-214651200 Enhancers Psoas Muscle Psoas
45 chr1:214647600-214649000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr1:214647600-214649200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr1:214647600-214649200 Weak transcription Colon Smooth Muscle Colon
48 chr1:214647600-214649200 Weak transcription HSMMtube muscle
49 chr1:214647600-214649400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr1:214647600-214650800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015