The 2.0 version of rSNPBase

Variant report

Variant rs5024205
Chromosome Location chr1:214608748-214608749
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214572600-214612600 Weak transcription Fetal Intestine Small intestine
2 chr1:214576800-214612200 Weak transcription Fetal Intestine Large intestine
3 chr1:214591400-214612800 Weak transcription Pancreas Pancrea
4 chr1:214593200-214613000 Weak transcription Fetal Muscle Leg muscle
5 chr1:214593400-214612800 Weak transcription Ovary ovary
6 chr1:214594000-214618000 Weak transcription Stomach Smooth Muscle stomach
7 chr1:214595400-214612800 Weak transcription Aorta Aorta
8 chr1:214596000-214614000 Weak transcription Right Ventricle heart
9 chr1:214596800-214612800 Weak transcription Left Ventricle heart
10 chr1:214600200-214612800 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr1:214601400-214612800 Weak transcription Adipose Nuclei Adipose
12 chr1:214601600-214611600 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr1:214601600-214625200 Weak transcription Esophagus oesophagus
14 chr1:214601600-214633000 Weak transcription Gastric stomach
15 chr1:214601800-214611200 Weak transcription HUES6 Cell Line embryonic stem cell
16 chr1:214601800-214612200 Weak transcription HUES48 Cell Line embryonic stem cell
17 chr1:214601800-214613000 Weak transcription Stomach Mucosa stomach
18 chr1:214602000-214612600 Weak transcription HSMMtube muscle
19 chr1:214602400-214611000 Weak transcription Thymus Thymus
20 chr1:214602400-214611800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr1:214602600-214609200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr1:214602600-214611400 Weak transcription Primary hematopoietic stem cells short term culture blood
23 chr1:214602800-214617600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr1:214603000-214609400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr1:214603800-214611400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr1:214603800-214611400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr1:214603800-214612000 Weak transcription Muscle Satellite Cultured Cells --
28 chr1:214604000-214611600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr1:214604000-214617600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr1:214604600-214612400 Weak transcription NH-A brain
31 chr1:214604600-214612800 Weak transcription NHDF-Ad bronchial
32 chr1:214604600-214613000 Weak transcription NHLF lung
33 chr1:214604800-214609200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr1:214604800-214611600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr1:214604800-214611600 Weak transcription NHEK skin
36 chr1:214605000-214611200 Weak transcription HSMM muscle
37 chr1:214605000-214611600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr1:214605600-214611000 Weak transcription HMEC breast
39 chr1:214605600-214611600 Weak transcription Psoas Muscle Psoas
40 chr1:214607400-214609200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
41 chr1:214607400-214609800 Strong transcription Osteobl bone
42 chr1:214608200-214609600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
43 chr1:214608200-214611400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr1:214608400-214609400 Weak transcription Breast Myoepithelial Primary Cells Breast
45 chr1:214608400-214611000 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr1:214608400-214611200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015