The 2.0 version of rSNPBase

Variant report

Variant rs17790515
Chromosome Location chr1:214646435-214646436
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214613000-214649400 Weak transcription Lung lung
2 chr1:214638200-214647400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:214638200-214649200 Weak transcription Aorta Aorta
4 chr1:214638400-214649000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:214638400-214649400 Weak transcription Right Ventricle heart
6 chr1:214638600-214646800 Weak transcription Fetal Adrenal Gland Adrenal Gland
7 chr1:214640200-214646600 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr1:214640200-214647400 Weak transcription Fetal Kidney kidney
9 chr1:214640200-214649400 Weak transcription Placenta Placenta
10 chr1:214640200-214650000 Weak transcription Fetal Lung lung
11 chr1:214640400-214649400 Weak transcription Pancreas Pancrea
12 chr1:214640800-214648000 Weak transcription ES-WA7 Cell Line embryonic stem cell
13 chr1:214640800-214649000 Weak transcription H1 Cell Line embryonic stem cell
14 chr1:214640800-214649400 Weak transcription Ovary ovary
15 chr1:214640800-214649400 Weak transcription Right Atrium heart
16 chr1:214640800-214649600 Weak transcription Fetal Muscle Leg muscle
17 chr1:214640800-214650200 Weak transcription Rectal Smooth Muscle rectum
18 chr1:214641200-214646600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr1:214641400-214647000 Weak transcription Colon Smooth Muscle Colon
20 chr1:214641400-214667800 Weak transcription Hela-S3 cervix
21 chr1:214642800-214646800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr1:214643000-214646600 Weak transcription Fetal Heart heart
23 chr1:214643200-214646600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr1:214644400-214648400 Enhancers HMEC breast
25 chr1:214644400-214650800 Enhancers iPS-20b Cell Line embryonic stem cell
26 chr1:214644600-214647000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr1:214644600-214647800 Enhancers Muscle Satellite Cultured Cells --
28 chr1:214644600-214649400 Enhancers ES-I3 Cell Line embryonic stem cell
29 chr1:214644600-214649600 Enhancers Breast Myoepithelial Primary Cells Breast
30 chr1:214644600-214651400 Enhancers HUES64 Cell Line embryonic stem cell
31 chr1:214644800-214647400 Enhancers Placenta Amnion Placenta Amnion
32 chr1:214644800-214649000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr1:214644800-214650600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr1:214644800-214651000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr1:214645000-214646800 Weak transcription HepG2 liver
36 chr1:214645000-214647200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr1:214645000-214647400 Weak transcription Fetal Intestine Small intestine
38 chr1:214645000-214648600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr1:214645000-214651800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr1:214645200-214647400 Weak transcription H9 Cell Line embryonic stem cell
41 chr1:214645200-214647800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
42 chr1:214645200-214656600 Weak transcription Fetal Intestine Large intestine
43 chr1:214645400-214647000 Enhancers Stomach Mucosa stomach
44 chr1:214645400-214647000 Weak transcription HUVEC blood vessel
45 chr1:214645400-214647800 Enhancers Skeletal Muscle Male skeletal muscle
46 chr1:214645400-214648800 Weak transcription Primary neutrophils fromperipheralblood blood
47 chr1:214645600-214647000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
48 chr1:214645600-214647200 Enhancers NHLF lung
49 chr1:214645600-214647400 Enhancers HSMM muscle
50 chr1:214645600-214649000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015